7g9s

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(New page: '''Unreleased structure''' The entry 7g9s is ON HOLD Authors: Godoy, A.S., Noske, G.D., Fairhead, M., Lithgo, R.M., Koekemoer, L., Aschenbrenner, J.C., Balcomb, B.H., Marples, P.G., Ni,...)
Current revision (12:32, 26 July 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7g9s is ON HOLD
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==PanDDA analysis group deposition -- Crystal Structure of Zika virus NS3 Helicase in complex with Z758198920==
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<StructureSection load='7g9s' size='340' side='right'caption='[[7g9s]], [[Resolution|resolution]] 2.09&Aring;' scene=''>
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Authors: Godoy, A.S., Noske, G.D., Fairhead, M., Lithgo, R.M., Koekemoer, L., Aschenbrenner, J.C., Balcomb, B.H., Marples, P.G., Ni, X., Tomlinson, C.W.E., Wild, C., Mesquita, N.C.M.R., Oliva, G., Fearon, D., Walsh, M.A., von Delft, F.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7g9s]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Zika_virus Zika virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7G9S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7G9S FirstGlance]. <br>
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Description: THE CRYSTAL STRUCTURE OF ZIKA VIRUS NS3 HELICASE DOMAIN
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.09&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZUW:1-(2,3-dihydro-1,4-benzoxazepin-4(5H)-yl)ethan-1-one'>ZUW</scene></td></tr>
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[[Category: Noske, G.D]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7g9s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7g9s OCA], [https://pdbe.org/7g9s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7g9s RCSB], [https://www.ebi.ac.uk/pdbsum/7g9s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7g9s ProSAT]</span></td></tr>
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[[Category: Balcomb, B.H]]
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</table>
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[[Category: Mesquita, N.C.M.R]]
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== Function ==
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[[Category: Lithgo, R.M]]
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[https://www.uniprot.org/uniprot/POLG_ZIKV POLG_ZIKV] Protein C: Encapsulates the genomic RNA.[UniProtKB:P17763] prM: Acts as a chaperone for envelope protein E during intracellular virion assembly by masking and inactivating envelope protein E fusion peptide. prM is matured in the last step of virion assembly, presumably to avoid catastrophic activation of the viral fusion peptide induced by the acidic pH of the trans-Golgi network. After cleavage by host furin, the pr peptide is released in the extracellular medium and small envelope protein M and envelope protein E homodimers are dissociated.[UniProtKB:P17763] Envelope protein E: Binding to host cell surface receptor is followed by virus internalization through clathrin-mediated endocytosis. Envelope protein E is subsequently involved in membrane fusion between virion and host late endosomes. Synthesized as a homodimer with prM which acts as a chaperone for envelope protein E. After cleavage of prM, envelope protein E dissociate from small envelope protein M and homodimerizes.[UniProtKB:P17763] Non-structural protein 1: Involved in virus replication and regulation of the innate immune response.[UniProtKB:P17763] Non-structural protein 2A: May be involved viral RNA replication and capsid assembly.[UniProtKB:P09732] Non-structural protein 4A: Induces host endoplasmic reticulum membrane rearrangements leading to the formation of virus-induced membranous vesicles hosting the dsRNA and polymerase, functioning as a replication complex. NS4A might also regulate the ATPase activity of the helicase region of Serine protease NS3 chain.[UniProtKB:P17763] Peptide 2k: Functions as a signal peptide for NS4B and is required for the interferon antagonism activity of the latter.[UniProtKB:P17763] Non-structural protein 4B: Inhibits interferon (IFN)-induced host STAT1 phosphorylation and nuclear translocation, thereby preventing the establishment of cellular antiviral state by blocking the IFN-alpha/beta pathway.[UniProtKB:P17763]
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[[Category: Godoy, A.S]]
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__TOC__
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[[Category: Fearon, D]]
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</StructureSection>
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[[Category: Walsh, M.A]]
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[[Category: Large Structures]]
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[[Category: Oliva, G]]
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[[Category: Zika virus]]
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[[Category: Fairhead, M]]
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[[Category: Aschenbrenner JC]]
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[[Category: Von Delft, F]]
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[[Category: Balcomb BH]]
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[[Category: Marples, P.G]]
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[[Category: Fairhead M]]
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[[Category: Koekemoer, L]]
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[[Category: Fearon D]]
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[[Category: Wild, C]]
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[[Category: Godoy AS]]
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[[Category: Ni, X]]
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[[Category: Koekemoer L]]
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[[Category: Aschenbrenner, J.C]]
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[[Category: Lithgo RM]]
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[[Category: Tomlinson, C.W.E]]
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[[Category: Marples PG]]
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[[Category: Mesquita NCMR]]
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[[Category: Ni X]]
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[[Category: Noske GD]]
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[[Category: Oliva G]]
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[[Category: Tomlinson CWE]]
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[[Category: Walsh MA]]
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[[Category: Wild C]]
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[[Category: Von Delft F]]

Current revision

PanDDA analysis group deposition -- Crystal Structure of Zika virus NS3 Helicase in complex with Z758198920

PDB ID 7g9s

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