7qx0

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Current revision (08:14, 16 August 2023) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 7qx0 is ON HOLD
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==Transaminase Structure of Plurienzyme (Tr2E2) in complex with PLP==
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<StructureSection load='7qx0' size='340' side='right'caption='[[7qx0]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[7qx0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidihalobacter Acidihalobacter]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=7QX0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=7QX0 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=7qx0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=7qx0 OCA], [https://pdbe.org/7qx0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=7qx0 RCSB], [https://www.ebi.ac.uk/pdbsum/7qx0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=7qx0 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/A0A3G5BC54_9GAMM A0A3G5BC54_9GAMM]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Engineering dual-function single polypeptide catalysts with two abiotic or biotic catalytic entities (or combinations of both) supporting cascade reactions is becoming an important area of enzyme engineering and catalysis. Herein we present the development of a PluriZyme, TR(2) E(2) , with efficient native transaminase (k(cat) : 69.49+/-1.77 min(-1) ) and artificial esterase (k(cat) : 3908-0.41 min(-1) ) activities integrated into a single scaffold, and evaluate its utility in a cascade reaction. TR(2) E(2) (pH(opt) : 8.0-9.5; T(opt) : 60-65 degrees C) efficiently converts methyl 3-oxo-4-(2,4,5-trifluorophenyl)butanoate into 3-(R)-amino-4-(2,4,5-trifluorophenyl)butanoic acid, a crucial intermediate for the synthesis of antidiabetic drugs. The reaction proceeds through the conversion of the beta-keto ester into the beta-keto acid at the hydrolytic site and subsequently into the beta-amino acid (e.e. &gt;99 %) at the transaminase site. The catalytic power of the TR(2) E(2) PluriZyme was proven with a set of beta-keto esters, demonstrating the potential of such designs to address bioinspired cascade reactions.
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Authors: Roda, S., Fernandez-Lopez, L., Benedens, M., Bollinger, A., Thies, S., Schumacher, J., Coscolin, C., Kazemi, M., Santiago, G., Gertzen, C.G., Gonzalez-Alfonso, J., Plou, F.J., Jaeger, K.E., Smits, S.H., Ferrer, M., Guallar, V.
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A Plurizyme with Transaminase and Hydrolase Activity Catalyzes Cascade Reactions.,Roda S, Fernandez-Lopez L, Benedens M, Bollinger A, Thies S, Schumacher J, Coscolin C, Kazemi M, Santiago G, Gertzen CGW, Gonzalez-Alfonso JL, Plou FJ, Jaeger KE, Smits SHJ, Ferrer M, Guallar V Angew Chem Int Ed Engl. 2022 Sep 12;61(37):e202207344. doi: , 10.1002/anie.202207344. Epub 2022 Aug 4. PMID:35734849<ref>PMID:35734849</ref>
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Description: Transaminase Structure of Plurienzyme (Tr2E2) in complex with PLP
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Kazemi, M]]
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<div class="pdbe-citations 7qx0" style="background-color:#fffaf0;"></div>
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[[Category: Schumacher, J]]
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== References ==
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[[Category: Bollinger, A]]
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<references/>
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[[Category: Fernandez-Lopez, L]]
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__TOC__
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[[Category: Thies, S]]
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</StructureSection>
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[[Category: Santiago, G]]
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[[Category: Acidihalobacter]]
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[[Category: Jaeger, K.E]]
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[[Category: Large Structures]]
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[[Category: Roda, S]]
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[[Category: Benedens M]]
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[[Category: Smits, S.H]]
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[[Category: Bollinger A]]
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[[Category: Gertzen, C.G]]
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[[Category: Coscolin C]]
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[[Category: Benedens, M]]
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[[Category: Fernandez-Lopez L]]
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[[Category: Coscolin, C]]
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[[Category: Ferrer M]]
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[[Category: Gonzalez-Alfonso, J]]
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[[Category: Gertzen CG]]
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[[Category: Plou, F.J]]
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[[Category: Gonzalez-Alfonso J]]
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[[Category: Ferrer, M]]
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[[Category: Guallar V]]
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[[Category: Guallar, V]]
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[[Category: Jaeger KE]]
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[[Category: Kazemi M]]
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[[Category: Plou FJ]]
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[[Category: Roda S]]
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[[Category: Santiago G]]
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[[Category: Schumacher J]]
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[[Category: Smits SH]]
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[[Category: Thies S]]

Current revision

Transaminase Structure of Plurienzyme (Tr2E2) in complex with PLP

PDB ID 7qx0

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