8pey
From Proteopedia
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- | '''Unreleased structure''' | ||
- | + | ==Rho P167L-ATPgS-Psu complex II locked== | |
+ | <StructureSection load='8pey' size='340' side='right'caption='[[8pey]], [[Resolution|resolution]] 3.00Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[8pey]] is a 23 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacteria_phage_P4 Enterobacteria phage P4] and [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8PEY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8PEY FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3Å</td></tr> | ||
+ | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AGS:PHOSPHOTHIOPHOSPHORIC+ACID-ADENYLATE+ESTER'>AGS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8pey FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8pey OCA], [https://pdbe.org/8pey PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8pey RCSB], [https://www.ebi.ac.uk/pdbsum/8pey PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8pey ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/RHO_ECOLI RHO_ECOLI] Facilitates transcription termination by a mechanism that involves rho binding to the nascent RNA, activation of rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template. RNA-dependent NTPAse which utilizes all four ribonucleoside triphosphates as substrates.[HAMAP-Rule:MF_01884] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Many bacteriophages modulate host transcription to favor expression of their own genomes. Phage satellite P4 polarity suppression protein, Psu, a building block of the viral capsid, inhibits hexameric transcription termination factor, rho, by presently unknown mechanisms. Our cryogenic electron microscopy structures of rho-Psu complexes show that Psu dimers clamp two inactive, open rho rings and promote their expansion to higher-oligomeric states. ATPase, nucleotide binding and nucleic acid binding studies revealed that Psu hinders rho ring closure and traps nucleotides in their binding pockets on rho. Structure-guided mutagenesis in combination with growth, pull-down, and termination assays further delineated the functional rho-Psu interfaces in vivo. Bioinformatic analyses revealed that Psu is associated with a wide variety of phage defense systems across Enterobacteriaceae, suggesting that Psu may regulate expression of anti-phage genes. Our findings show that modulation of the rho oligomeric state via diverse strategies is a pervasive gene regulatory principle in bacteria. | ||
- | + | The Psu protein of phage satellite P4 inhibits transcription termination factor rho by forced hyper-oligomerization.,Gjorgjevikj D, Kumar N, Wang B, Hilal T, Said N, Loll B, Artsimovitch I, Sen R, Wahl MC Nat Commun. 2025 Jan 9;16(1):550. doi: 10.1038/s41467-025-55897-9. PMID:39788982<ref>PMID:39788982</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | [[Category: | + | </div> |
- | [[Category: Gjorgjevikj | + | <div class="pdbe-citations 8pey" style="background-color:#fffaf0;"></div> |
- | [[Category: | + | == References == |
- | [[Category: | + | <references/> |
- | [[Category: Wahl | + | __TOC__ |
+ | </StructureSection> | ||
+ | [[Category: Enterobacteria phage P4]] | ||
+ | [[Category: Escherichia coli]] | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Gjorgjevikj D]] | ||
+ | [[Category: Hilal T]] | ||
+ | [[Category: Loll B]] | ||
+ | [[Category: Wahl MC]] |
Current revision
Rho P167L-ATPgS-Psu complex II locked
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