1n8m

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[[Image:1n8m.jpg|left|200px]]
 
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==Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels==
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The line below this paragraph, containing "STRUCTURE_1n8m", creates the "Structure Box" on the page.
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<StructureSection load='1n8m' size='340' side='right'caption='[[1n8m]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1n8m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pandinus_imperator Pandinus imperator]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N8M FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 10 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n8m OCA], [https://pdbe.org/1n8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n8m RCSB], [https://www.ebi.ac.uk/pdbsum/1n8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n8m ProSAT]</span></td></tr>
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{{STRUCTURE_1n8m| PDB=1n8m | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/KAX64_PANIM KAX64_PANIM] Potently, completely and reversibly blocks voltage-gated potassium channel Kv1.2/KCNA2 and Shaker B (Sh). Also blocks small conductance (SK) calcium-activated potassium channel (KCNN).<ref>PMID:12919322</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Pi4 is a short toxin found at very low abundance in the venom of Pandinus imperator scorpions. It is a potent blocker of K(+) channels. Like the other members of the alpha-KTX6 subfamily to which it belongs, it is cross-linked by four disulfide bonds. The synthetic analog (sPi4) and the natural toxin (nPi4) have been obtained by solid-phase synthesis or from scorpion venom, respectively. Analysis of two-dimensional (1)H NMR spectra of nPi4 and sPi4 indicates that both peptides have the same structure. Moreover, electrophysiological recordings of the blocking of Shaker B K(+) channels by sPi4 (K(D) = 8.5 nM) indicate that sPi4 has the same blocking activity of nPi4 (K(D) = 8.0 nM), previously described. The disulfide bonds have been independently determined by NMR and structure calculations, and by Edman-degradation/mass-spectrometry identification of peptides obtained by proteolysis of nPi4. Both approaches indicate that the pairing of the half-cystines is (6)C-(27)C, (12)C-(32)C, (16)C-(34)C, and (22)C-(37)C. The structure of the toxin has been determined by using 705 constraints derived from NMR data on sPi4. The structure, which is well defined, shows the characteristic alpha/beta scaffold of scorpion toxins. It is compared to the structure of the other alpha-KTX6 subfamily members and, in particular, to the structure of maurotoxin, which shows a different pattern of disulfide bridges despite its high degree of sequence identity (76%) with Pi4. The structure of Pi4 and the high amounts of synthetic peptide available, will enable the detailed analysis of the interaction of Pi4 with K(+) channels.
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'''Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels'''
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Solution structure of Pi4, a short four-disulfide-bridged scorpion toxin specific of potassium channels.,Guijarro JI, M'Barek S, Gomez-Lagunas F, Garnier D, Rochat H, Sabatier JM, Possani L, Delepierre M Protein Sci. 2003 Sep;12(9):1844-54. PMID:12930984<ref>PMID:12930984</ref>
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==Overview==
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Pi4 is a short toxin found at very low abundance in the venom of Pandinus imperator scorpions. It is a potent blocker of K(+) channels. Like the other members of the alpha-KTX6 subfamily to which it belongs, it is cross-linked by four disulfide bonds. The synthetic analog (sPi4) and the natural toxin (nPi4) have been obtained by solid-phase synthesis or from scorpion venom, respectively. Analysis of two-dimensional (1)H NMR spectra of nPi4 and sPi4 indicates that both peptides have the same structure. Moreover, electrophysiological recordings of the blocking of Shaker B K(+) channels by sPi4 (K(D) = 8.5 nM) indicate that sPi4 has the same blocking activity of nPi4 (K(D) = 8.0 nM), previously described. The disulfide bonds have been independently determined by NMR and structure calculations, and by Edman-degradation/mass-spectrometry identification of peptides obtained by proteolysis of nPi4. Both approaches indicate that the pairing of the half-cystines is (6)C-(27)C, (12)C-(32)C, (16)C-(34)C, and (22)C-(37)C. The structure of the toxin has been determined by using 705 constraints derived from NMR data on sPi4. The structure, which is well defined, shows the characteristic alpha/beta scaffold of scorpion toxins. It is compared to the structure of the other alpha-KTX6 subfamily members and, in particular, to the structure of maurotoxin, which shows a different pattern of disulfide bridges despite its high degree of sequence identity (76%) with Pi4. The structure of Pi4 and the high amounts of synthetic peptide available, will enable the detailed analysis of the interaction of Pi4 with K(+) channels.
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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1N8M is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N8M OCA].
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</div>
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<div class="pdbe-citations 1n8m" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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Solution structure of Pi4, a short four-disulfide-bridged scorpion toxin specific of potassium channels., Guijarro JI, M'Barek S, Gomez-Lagunas F, Garnier D, Rochat H, Sabatier JM, Possani L, Delepierre M, Protein Sci. 2003 Sep;12(9):1844-54. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12930984 12930984]
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*[[Potassium channel toxin 3D structures|Potassium channel toxin 3D structures]]
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[[Category: Single protein]]
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== References ==
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[[Category: Barek, S M.]]
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<references/>
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[[Category: Delepierre, M.]]
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__TOC__
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[[Category: Garnier, D.]]
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</StructureSection>
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[[Category: Gomez-Lagunas, F.]]
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[[Category: Large Structures]]
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[[Category: Guijarro, J I.]]
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[[Category: Pandinus imperator]]
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[[Category: Olamendi-Portugal, T.]]
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[[Category: Delepierre M]]
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[[Category: Possani, L D.]]
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[[Category: Garnier D]]
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[[Category: Rochat, H.]]
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[[Category: Gomez-Lagunas F]]
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[[Category: Sabatier, J M.]]
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[[Category: Guijarro JI]]
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[[Category: Disulfide bridge stabilized alpha beta motif]]
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[[Category: M'Barek S]]
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[[Category: Potassium channel blocker]]
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[[Category: Olamendi-Portugal T]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:13:41 2008''
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[[Category: Possani LD]]
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[[Category: Rochat H]]
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[[Category: Sabatier JM]]

Current revision

Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels

PDB ID 1n8m

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