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1n8m
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| - | [[Image:1n8m.jpg|left|200px]] | ||
| - | < | + | ==Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels== |
| - | + | <StructureSection load='1n8m' size='340' side='right'caption='[[1n8m]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | or the | + | <table><tr><td colspan='2'>[[1n8m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pandinus_imperator Pandinus imperator]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N8M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N8M FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n8m OCA], [https://pdbe.org/1n8m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n8m RCSB], [https://www.ebi.ac.uk/pdbsum/1n8m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n8m ProSAT]</span></td></tr> |
| - | + | </table> | |
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/KAX64_PANIM KAX64_PANIM] Potently, completely and reversibly blocks voltage-gated potassium channel Kv1.2/KCNA2 and Shaker B (Sh). Also blocks small conductance (SK) calcium-activated potassium channel (KCNN).<ref>PMID:12919322</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Pi4 is a short toxin found at very low abundance in the venom of Pandinus imperator scorpions. It is a potent blocker of K(+) channels. Like the other members of the alpha-KTX6 subfamily to which it belongs, it is cross-linked by four disulfide bonds. The synthetic analog (sPi4) and the natural toxin (nPi4) have been obtained by solid-phase synthesis or from scorpion venom, respectively. Analysis of two-dimensional (1)H NMR spectra of nPi4 and sPi4 indicates that both peptides have the same structure. Moreover, electrophysiological recordings of the blocking of Shaker B K(+) channels by sPi4 (K(D) = 8.5 nM) indicate that sPi4 has the same blocking activity of nPi4 (K(D) = 8.0 nM), previously described. The disulfide bonds have been independently determined by NMR and structure calculations, and by Edman-degradation/mass-spectrometry identification of peptides obtained by proteolysis of nPi4. Both approaches indicate that the pairing of the half-cystines is (6)C-(27)C, (12)C-(32)C, (16)C-(34)C, and (22)C-(37)C. The structure of the toxin has been determined by using 705 constraints derived from NMR data on sPi4. The structure, which is well defined, shows the characteristic alpha/beta scaffold of scorpion toxins. It is compared to the structure of the other alpha-KTX6 subfamily members and, in particular, to the structure of maurotoxin, which shows a different pattern of disulfide bridges despite its high degree of sequence identity (76%) with Pi4. The structure of Pi4 and the high amounts of synthetic peptide available, will enable the detailed analysis of the interaction of Pi4 with K(+) channels. | ||
| - | + | Solution structure of Pi4, a short four-disulfide-bridged scorpion toxin specific of potassium channels.,Guijarro JI, M'Barek S, Gomez-Lagunas F, Garnier D, Rochat H, Sabatier JM, Possani L, Delepierre M Protein Sci. 2003 Sep;12(9):1844-54. PMID:12930984<ref>PMID:12930984</ref> | |
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| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| + | <div class="pdbe-citations 1n8m" style="background-color:#fffaf0;"></div> | ||
| - | == | + | ==See Also== |
| - | + | *[[Potassium channel toxin 3D structures|Potassium channel toxin 3D structures]] | |
| - | [[Category: | + | == References == |
| - | [[Category: | + | <references/> |
| - | [[Category: Delepierre | + | __TOC__ |
| - | [[Category: Garnier | + | </StructureSection> |
| - | [[Category: Gomez-Lagunas | + | [[Category: Large Structures]] |
| - | [[Category: Guijarro | + | [[Category: Pandinus imperator]] |
| - | [[Category: Olamendi-Portugal | + | [[Category: Delepierre M]] |
| - | [[Category: Possani | + | [[Category: Garnier D]] |
| - | [[Category: Rochat | + | [[Category: Gomez-Lagunas F]] |
| - | [[Category: Sabatier | + | [[Category: Guijarro JI]] |
| - | + | [[Category: M'Barek S]] | |
| - | + | [[Category: Olamendi-Portugal T]] | |
| - | + | [[Category: Possani LD]] | |
| + | [[Category: Rochat H]] | ||
| + | [[Category: Sabatier JM]] | ||
Current revision
Solution structure of Pi4, a four disulfide bridged scorpion toxin active on potassium channels
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