1ne2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (04:44, 17 October 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1ne2.gif|left|200px]]
 
-
<!--
+
==Crystal Structure of Thermoplasma acidophilum 1320 (APC5513)==
-
The line below this paragraph, containing "STRUCTURE_1ne2", creates the "Structure Box" on the page.
+
<StructureSection load='1ne2' size='340' side='right'caption='[[1ne2]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ne2]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NE2 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1ne2| PDB=1ne2 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ne2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ne2 OCA], [https://pdbe.org/1ne2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ne2 RCSB], [https://www.ebi.ac.uk/pdbsum/1ne2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ne2 ProSAT], [https://www.topsan.org/Proteins/MCSG/1ne2 TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal Structure of Thermoplasma acidophilum 1320 (APC5513)'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9HIL9_THEAC Q9HIL9_THEAC]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1NE2 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermoplasma_acidophilum Thermoplasma acidophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NE2 OCA].
+
Check<jmol>
-
[[Category: Single protein]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ne/1ne2_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ne2 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermoplasma acidophilum]]
[[Category: Thermoplasma acidophilum]]
-
[[Category: Christendat, D.]]
+
[[Category: Christendat D]]
-
[[Category: Edwards, A.]]
+
[[Category: Edwards A]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Joachimiak A]]
-
[[Category: Kim, Y.]]
+
[[Category: Kim Y]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Xu X]]
-
[[Category: Xu, X.]]
+
-
[[Category: Conserved hypothetical protein]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:25:13 2008''
+

Current revision

Crystal Structure of Thermoplasma acidophilum 1320 (APC5513)

PDB ID 1ne2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools