6ump
From Proteopedia
(Difference between revisions)
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<StructureSection load='6ump' size='340' side='right'caption='[[6ump]], [[Resolution|resolution]] 2.80Å' scene=''> | <StructureSection load='6ump' size='340' side='right'caption='[[6ump]], [[Resolution|resolution]] 2.80Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
- | <table><tr><td colspan='2'> | + | <table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6UMP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6UMP FirstGlance]. <br> |
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8Å</td></tr> | ||
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ump FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ump OCA], [https://pdbe.org/6ump PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ump RCSB], [https://www.ebi.ac.uk/pdbsum/6ump PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ump ProSAT]</span></td></tr> | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6ump FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6ump OCA], [https://pdbe.org/6ump PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6ump RCSB], [https://www.ebi.ac.uk/pdbsum/6ump PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6ump ProSAT]</span></td></tr> | ||
</table> | </table> | ||
- | == Function == | ||
- | [https://www.uniprot.org/uniprot/UBC_HUMAN UBC_HUMAN] Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repair; Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation; Lys-29-linked is involved in lysosomal degradation; Lys-33-linked is involved in kinase modification; Lys-48-linked is involved in protein degradation via the proteasome; Lys-63-linked is involved in endocytosis, DNA-damage responses as well as in signaling processes leading to activation of the transcription factor NF-kappa-B. Linear polymer chains formed via attachment by the initiator Met lead to cell signaling. Ubiquitin is usually conjugated to Lys residues of target proteins, however, in rare cases, conjugation to Cys or Ser residues has been observed. When polyubiquitin is free (unanchored-polyubiquitin), it also has distinct roles, such as in activation of protein kinases, and in signaling.<ref>PMID:16543144</ref> <ref>PMID:19754430</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
- | [[Category: Homo sapiens]] | ||
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
- | [[Category: Legionella pneumophila]] | ||
[[Category: Das C]] | [[Category: Das C]] | ||
[[Category: Iyer S]] | [[Category: Iyer S]] | ||
[[Category: Luo ZQ]] | [[Category: Luo ZQ]] | ||
[[Category: Puvar K]] | [[Category: Puvar K]] |
Current revision
Crystal structure of MavC in complex with substrate mimic in P65 space group
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Categories: Large Structures | Das C | Iyer S | Luo ZQ | Puvar K