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1nij

From Proteopedia

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[[Image:1nij.jpg|left|200px]]
 
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==YJIA PROTEIN==
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The line below this paragraph, containing "STRUCTURE_1nij", creates the "Structure Box" on the page.
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<StructureSection load='1nij' size='340' side='right'caption='[[1nij]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1nij]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NIJ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nij OCA], [https://pdbe.org/1nij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nij RCSB], [https://www.ebi.ac.uk/pdbsum/1nij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nij ProSAT]</span></td></tr>
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{{STRUCTURE_1nij| PDB=1nij | SCENE= }}
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</table>
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== Function ==
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'''YJIA PROTEIN'''
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[https://www.uniprot.org/uniprot/YJIA_ECOLI YJIA_ECOLI] Binds GTP. May function as GTP-dependent regulator.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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1NIJ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NIJ OCA].
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/1nij_consurf.spt"</scriptWhenChecked>
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==Reference==
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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Crystal structure of the Escherichia coli YjiA protein suggests a GTP-dependent regulatory function., Khil PP, Obmolova G, Teplyakov A, Howard AJ, Gilliland GL, Camerini-Otero RD, Proteins. 2004 Feb 1;54(2):371-4. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14696199 14696199]
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nij ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Camerini-Otero, R D.]]
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[[Category: Camerini-Otero RD]]
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[[Category: Gilliland, G L.]]
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[[Category: Gilliland GL]]
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[[Category: Howard, A J.]]
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[[Category: Howard AJ]]
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[[Category: Khil, P P.]]
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[[Category: Khil PP]]
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[[Category: Obmolova, G.]]
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[[Category: Obmolova G]]
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[[Category: S2F, Structure 2.Function Project.]]
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[[Category: Teplyakov A]]
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[[Category: Teplyakov, A.]]
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[[Category: Gtp binding]]
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[[Category: P-loop protein]]
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[[Category: S2f]]
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[[Category: Structural genomic]]
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[[Category: Structure 2 function project]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 02:34:35 2008''
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Current revision

YJIA PROTEIN

PDB ID 1nij

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