Riboswitch 3D structures
From Proteopedia
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**[[6ues]], [[6wlq]], [[6wlr]] - MtSAMR – ''Mycobacterium tuberculosis''<br /> | **[[6ues]], [[6wlq]], [[6wlr]] - MtSAMR – ''Mycobacterium tuberculosis''<br /> | ||
**[[6uet]] - MtSAMR + SAM<br /> | **[[6uet]] - MtSAMR + SAM<br /> | ||
| - | **[[3gx5]], [[3gx6]], [[3gx7]] - | + | **[[3gx5]], [[3gx6]], [[3gx7]] - TtSAMR + SAM <br /> |
**[[6laz]] - BaSAMR + U1 small nuclear ribonucleoprotein + GTP + SAM analog – ''Bifidobacterium angulatum''<br /> | **[[6laz]] - BaSAMR + U1 small nuclear ribonucleoprotein + GTP + SAM analog – ''Bifidobacterium angulatum''<br /> | ||
**[[6las]], [[6lax]] - BaSAMR + U1 small nuclear ribonucleoprotein + SAM<br /> | **[[6las]], [[6lax]] - BaSAMR + U1 small nuclear ribonucleoprotein + SAM<br /> | ||
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**[[7d7w]], [[7d7x]], [[7d7z]], [[7d81]], [[7d82]] – AbNADR + NAD - ''Acidobacteriaceae bacterium''<br /> | **[[7d7w]], [[7d7x]], [[7d7z]], [[7d81]], [[7d82]] – AbNADR + NAD - ''Acidobacteriaceae bacterium''<br /> | ||
**[[7d7v]] – AbNADR + NAD + U1 small nuclear ribonucleoprotein<br /> | **[[7d7v]] – AbNADR + NAD + U1 small nuclear ribonucleoprotein<br /> | ||
| - | |||
| - | *ZTP riboswitch | ||
| - | |||
| - | **[[6od9]] – FuZTP – Fusobacterium ulcerans<br /> | ||
| - | **[[6wzr]], [[6wzs]] – FuZTP + pyridine derivative<br /> | ||
*Lysine riboswitch | *Lysine riboswitch | ||
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**[[4znp]] – PFIR + AICAR – synthetic<br /> | **[[4znp]] – PFIR + AICAR – synthetic<br /> | ||
| - | * | + | *NiCo riboswitch |
| - | **[[4rum]] – | + | **[[4rum]] – NiCoR + Co – synthetic<br /> |
*ZMP riboswitch | *ZMP riboswitch | ||
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*ZTP riboswitch | *ZTP riboswitch | ||
| - | **[[ | + | **[[6od9]] – FuZTP – ''Fusobacterium ulcerans''<br /> |
| + | **[[6wzr]], [[6wzs]] – FuZTP + pyridine derivative<br /> | ||
| + | **[[5btp]] – FuZTPR + AICAR <br /> | ||
*Deoxyguanosine riboswitch | *Deoxyguanosine riboswitch | ||
Current revision
3D structures of riboswitch
Updated on 11-August-2024
S-adenosylhomocysteine riboswitch or SAH riboswitch
C-di-GMP riboswitch
Fluoride riboswitch
3vrs – TpFR + Mn + K + F – Thermotoga petrophila
4en5 – TpFR + Mg + Tl + F
4enc – TpFR + Mg + K + F
4ena – TpFR + Mg + Cs + GTP + F
4enb – TpFR + Mg + Ir + K + GTP + F
4frg, 4frn, 4gma, 4gxy – CoR + aptamer domain – Marine metagenome
