8xcd

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(New page: '''Unreleased structure''' The entry 8xcd is ON HOLD Authors: Description: Category: Unreleased Structures)
Current revision (07:47, 21 November 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8xcd is ON HOLD
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==Macaca fascicularis NTCP in complex with YN69083 Fab==
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<StructureSection load='8xcd' size='340' side='right'caption='[[8xcd]], [[Resolution|resolution]] 3.49&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8xcd]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Macaca_fascicularis Macaca fascicularis] and [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8XCD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8XCD FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.49&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=TCH:TAUROCHOLIC+ACID'>TCH</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8xcd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8xcd OCA], [https://pdbe.org/8xcd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8xcd RCSB], [https://www.ebi.ac.uk/pdbsum/8xcd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8xcd ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Macaque restricts hepatitis B virus (HBV) infection because its receptor homologue, NTCP (mNTCP), cannot bind preS1 on viral surface. To reveal how mNTCP loses the viral receptor function, we here solve the cryo-electron microscopy structure of mNTCP. Superposing on the human NTCP (hNTCP)-preS1 complex structure shows that Arg158 of mNTCP causes steric clash to prevent preS1 from embedding onto the bile acid tunnel of NTCP. Cell-based mutation analysis confirms that only Gly158 permitted preS1 binding, in contrast to robust bile acid transport among mutations. As the second determinant, Asn86 on the extracellular surface of mNTCP shows less capacity to restrain preS1 from dynamic fluctuation than Lys86 of hNTCP, resulting in unstable preS1 binding. Additionally, presence of long-chain conjugated-bile acids in the tunnel induces steric hindrance with preS1 through their tailed-chain. This study presents structural basis in which multiple sites in mNTCP constitute a molecular barrier to strictly restrict HBV.
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Authors:
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Structural basis for hepatitis B virus restriction by a viral receptor homologue.,Shionoya K, Park JH, Ekimoto T, Takeuchi JS, Mifune J, Morita T, Ishimoto N, Umezawa H, Yamamoto K, Kobayashi C, Kusunoki A, Nomura N, Iwata S, Muramatsu M, Tame JRH, Ikeguchi M, Park SY, Watashi K Nat Commun. 2024 Oct 25;15(1):9241. doi: 10.1038/s41467-024-53533-6. PMID:39455604<ref>PMID:39455604</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 8xcd" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Macaca fascicularis]]
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[[Category: Mus musculus]]
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[[Category: Ishimoto N]]
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[[Category: Park JH]]
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[[Category: Park SY]]

Current revision

Macaca fascicularis NTCP in complex with YN69083 Fab

PDB ID 8xcd

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