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Template:STRUCTURE 1ppb

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(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1ppb, resolution 1.92&Aring; (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=CH2...)
Current revision (13:47, 27 February 2013) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1ppb, resolution 1.92&Aring; (<scene name='initialview01'>initial scene</scene>)
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1ppb]], [[Resolution|resolution]] 1.92&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|SITE=
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|LIGAND= <scene name='pdbligand=0G6:D-PHENYLALANYL-N-[(2S,3S)-6-{[AMINO(IMINIO)METHYL]AMINO}-1-CHLORO-2-HYDROXYHEXAN-3-YL]-L-PROLINAMIDE'>0G6</scene>
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|LIGAND= <scene name='pdbligand=CH2:METHYLENE+GROUP'>CH2</scene>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thrombin Thrombin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.5 3.4.21.5] </span>
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|GENE=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppb OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1ppb RCSB], [http://www.ebi.ac.uk/pdbsum/1ppb PDBsum]</span>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09396 Thrombin_light], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00190 Tryp_SPc]</span>
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|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/1ppbH01 1Ppbh01], [http://www.cathdb.info/domain/1ppbH02 1Ppbh02]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000001 Ipr000001], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009003 Ipr009003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR017857 Ipr017857], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR003966 Ipr003966], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018992 Ipr018992], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013806 Ipr013806], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018056 Ipr018056], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001254 Ipr001254], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018114 Ipr018114], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR000294 Ipr000294], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001314 Ipr001314]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00089 PF00089], [http://pfam.sanger.ac.uk/family?acc=PF09396 PF09396]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&amp;key=26089 d1ppb.1]</span>
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|RELATEDENTRY=
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|uPDB=1PPB|CONSURF={{!}}-
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1ppb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ppb OCA], [http://www.ebi.ac.uk/pdbsum/1ppb PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1ppb RCSB]</span>
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
 +
<jmolButton>
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<script></script>
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<text>L [x]</text>
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<name>jmb_1ppb_L</name>
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<title>toggle chain L</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>H [x]</text>
 +
<name>jmb_1ppb_H</name>
 +
<title>toggle chain H</title>
 +
<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
 +
<jmol>
 +
<jmolButton>
 +
<script></script>
 +
<text>I [x]</text>
 +
<name>jmb_1ppb_I</name>
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<title>toggle chain I</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
 +
<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
1ppb, resolution 1.92Å ()
Ligands:
Activity: Thrombin, with EC number 3.4.21.5
Resources: FirstGlance, OCA, RCSB, PDBsum
Coordinates: save as pdb, mmCIF, xml


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