8y9g

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(New page: '''Unreleased structure''' The entry 8y9g is ON HOLD Authors: Dehai, L., Yuzhong, Z., Wenxue, W., Peng, W. Description: Versatile Aromatic Prenyltransferase auraA in complex with DMSPP...)
Current revision (06:23, 5 February 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8y9g is ON HOLD
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==Versatile Aromatic Prenyltransferase auraA in complex with DMSPP and cyclo-(L-Val-DH-His)==
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<StructureSection load='8y9g' size='340' side='right'caption='[[8y9g]], [[Resolution|resolution]] 2.67&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8y9g]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Penicillium Penicillium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8Y9G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8Y9G FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.67&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1LYF:(3~{Z},6~{S})-3-(1~{H}-imidazol-4-ylmethylidene)-6-propan-2-yl-piperazine-2,5-dione'>A1LYF</scene>, <scene name='pdbligand=DST:DIMETHYLALLYL+S-THIOLODIPHOSPHATE'>DST</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8y9g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8y9g OCA], [https://pdbe.org/8y9g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8y9g RCSB], [https://www.ebi.ac.uk/pdbsum/8y9g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8y9g ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Prenylation modifications of natural products play essential roles in chemical diversity and bioactivities, but imidazole modification prenyltransferases are not well investigated. Here, we discover a dimethylallyl tryptophan synthase family prenyltransferase, AuraA, that catalyzes the rare dimethylallylation on the imidazole moiety in the biosynthesis of aurantiamine. Biochemical assays validate that AuraA could accept both cyclo-(L-Val-L-His) and cyclo-(L-Val-DH-His) as substrates, while the prenylation modes are completely different, yielding C2-regular and C5-reverse products, respectively. Cryo-electron microscopy analysis of AuraA and its two ternary complex structures reveal two distinct modes for receptor binding, demonstrating a tolerance for altered orientations of highly similar receptors. The mutation experiments further demonstrate the promiscuity of AuraA towards imidazole-C-dimethylallylation. In this work, we also characterize a case of AuraA mutant-catalyzed dimethylallylation of imidazole moiety, offering available structural insights into the utilization and engineering of dimethylallyl tryptophan synthase family prenyltransferases.
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Authors: Dehai, L., Yuzhong, Z., Wenxue, W., Peng, W.
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Characterization and structural analysis of a versatile aromatic prenyltransferase for imidazole-containing diketopiperazines.,Wang W, Wang P, Ma C, Li K, Wang Z, Liu Y, Wang L, Zhang G, Che Q, Zhu T, Zhang Y, Li D Nat Commun. 2025 Jan 2;16(1):144. doi: 10.1038/s41467-024-55537-8. PMID:39747040<ref>PMID:39747040</ref>
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Description: Versatile Aromatic Prenyltransferase auraA in complex with DMSPP and cyclo-(L-Val-DH-His)
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Dehai, L]]
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<div class="pdbe-citations 8y9g" style="background-color:#fffaf0;"></div>
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[[Category: Yuzhong, Z]]
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== References ==
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[[Category: Wenxue, W]]
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<references/>
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[[Category: Peng, W]]
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Penicillium]]
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[[Category: Li D]]
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[[Category: Wang P]]
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[[Category: Wang W]]
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[[Category: Zhang Y]]

Current revision

Versatile Aromatic Prenyltransferase auraA in complex with DMSPP and cyclo-(L-Val-DH-His)

PDB ID 8y9g

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