User:Merritt Jugo/Sandbox 1

From Proteopedia

< User:Merritt Jugo(Difference between revisions)
Jump to: navigation, search
Current revision (16:27, 29 April 2024) (edit) (undo)
 
(44 intermediate revisions not shown.)
Line 1: Line 1:
=''Merritt's Take on DPPIV''=
=''Merritt's Take on DPPIV''=
-
<StructureSection load='6B1E' size='350' frame='true' side='right' caption='Dipeptidyl Peptidase IV (6B1E)' scene='10/1037493/Beta_propeller_in_white/1'>
+
<StructureSection load='6B1E' size='350' frame='true' side='right' caption='Dipeptidyl Peptidase IV (6B1E)' scene='10/1037493/Starter_dppiv_colors/10'>
-
This is a default text for your page '''Merritt Jugo/Sandbox 1'''. Click above on '''edit this page''' to modify. Be careful with the &lt; and &gt; signs.
+
-
You may include any references to papers as in: the use of JSmol in Proteopedia <ref>DOI 10.1002/ijch.201300024</ref> or to the article describing Jmol <ref>PMID:21638687</ref> to the rescue.
+
-
==Introduction==
 
-
==Function==
 
-
===Catalytic Triad===
+
oxyanion hole: TYR 631
-
The [https://en.wikipedia.org/wiki/Catalytic_triad#:~:text=A%20catalytic%20triad%20is%20a,lipases%20and%20β%2Dlactamases). Catalytic Triad] of DPP4 is Ser630, His740, Asp708.
+
catalytic triad: SER630, HIS740, ASP708
 +
==Structural highlights==
 +
cleavage site (dim gray) 1-55
 +
beta-propeller (tomato) 56-496
 +
cytosine rich (khaki) 351-506
 +
catalytic domain (medium sea green) 552-776
 +
<scene name='10/1037493/Starter_dppiv_colors/10'>Starter DPPIV movie with color</scene>
-
===Mechanism===
+
homodimer A (lavender) and B (dim gray)
-
[[Image:DPPIV_Mech.png|400 px|right|thumb|Figure 1. The coolest image of this protein EVAH!!!]]
+
<scene name='10/1037493/Homodimer/4'>Homodimer</scene>
-
==Disease==
+
beta-propeller (tomato) 56-496
 +
<scene name='10/1037493/Beta_propeller/3'>Beta-propeller</scene>
-
==Relevance==
+
catalytic domain (medium sea green) 552-776
 +
<scene name='10/1037493/Catalytic_domain/1'>Catalytic Domain</scene>
-
==Structural highlights==
+
cytosine rich region (khaki) 351-506
 +
<scene name='10/1037493/Cystine_rich_region/1'>Cystine-Rich Region</scene>
-
<scene name='10/1037493/Beta_propeller_in_white/7'>Beta Propeller</scene>
+
disulfide bonds (goldenrod) 394, 385, 444, 447, 472, 454 (khaki) 315-506
 +
<scene name='10/1037493/Disulfide_bonds/1'>Disulfide Bonds</scene>
-
This is a sample scene created with SAT to <scene name="/12/3456/Sample/1">color</scene> by Group, and another to make <scene name="/12/3456/Sample/2">a transparent representation</scene> of the protein. You can make your own scenes on SAT starting from scratch or loading and editing one of these sample scenes.
+
 
 +
 
 +
 
 +
 
 +
 
 +
___________
 +
 
 +
 
 +
 
 +
Caveolin-1 binding site (ADA) 201-210 and See 630
 +
<scene name='10/1037493/Cav_binding/1'>cav binding site</scene>
 +
 
 +
<scene name='10/1037493/Cav_binding_with_beta_prop/1'>cav binding with beta prop</scene>
 +
 
 +
<scene name='10/1037493/Cav-1_overview/2'>Cav-1 Overview</scene>
 +
 
 +
 
 +
<scene name='10/1037493/Cav-1_overview/3'>Cav-1 Overview with caption</scene>
</StructureSection>
</StructureSection>
==References==
==References==
 +
<references/>
<references/>
==Student Contributors==
==Student Contributors==
*Merritt Jugo
*Merritt Jugo

Current revision

Merritt's Take on DPPIV

Dipeptidyl Peptidase IV (6B1E)

Drag the structure with the mouse to rotate

References


Student Contributors

  • Merritt Jugo

Proteopedia Page Contributors and Editors (what is this?)

Merritt Jugo

Retrieved from "http://52.214.119.220/wiki/index.php/User:Merritt_Jugo/Sandbox_1"
Personal tools