9azr

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'''Unreleased structure'''
 
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The entry 9azr is ON HOLD
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==Lineage 860 UCA Fab bound to A/Massachusetts/1/1990 hemagglutinin head==
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<StructureSection load='9azr' size='340' side='right'caption='[[9azr]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9azr]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Influenza_A_virus_(A/Massachusetts/1/1990(H1N1)) Influenza A virus (A/Massachusetts/1/1990(H1N1))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9AZR OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9AZR FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9azr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9azr OCA], [https://pdbe.org/9azr PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9azr RCSB], [https://www.ebi.ac.uk/pdbsum/9azr PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9azr ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q07775_9INFA Q07775_9INFA] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore.[RuleBase:RU003324]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Initial exposure to a rapidly evolving virus establishes B cell memory that biases later responses to antigenically drifted strains. This "immune imprinting" implies that subsequent exposure to a drifted strain can induce affinity maturation of memory B cells toward cross-reactivity with the drifted strain and hence toward greater overall breadth. Here, we used deep mutational scanning of H1 influenza hemagglutinins (HAs) to investigate how viruses evolve in response to these broad antibody response. We identified escape mutations from clonal antibody lineages that targeted the receptor binding site and lateral patch. By adjusting the antigen-antibody contacts, antibody affinity maturation restricted the potential escape routes for the eliciting strain. However, escape occurred readily in drifted strains. We attribute this escape-prone property of the drifted strains to epistatic networks within HA. Our data explain how the influenza virus continues to evolve in the human population by escaping even broad antibody responses.
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Authors: Maurer, D.P., Schmidt, A.G.
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Antigenic drift expands influenza viral escape pathways from recalled humoral immunity.,Maurer DP, Vu M, Schmidt AG Immunity. 2025 Feb 25:S1074-7613(25)00074-3. doi: 10.1016/j.immuni.2025.02.006. PMID:40023162<ref>PMID:40023162</ref>
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Description: Lineage 860 UCA Fab bound to A/Massachusetts/1/1990 hemagglutinin head
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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[[Category: Maurer, D.P]]
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<div class="pdbe-citations 9azr" style="background-color:#fffaf0;"></div>
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[[Category: Schmidt, A.G]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Maurer DP]]
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[[Category: Schmidt AG]]

Current revision

Lineage 860 UCA Fab bound to A/Massachusetts/1/1990 hemagglutinin head

PDB ID 9azr

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