This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1r7o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:24, 25 October 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1r7o.gif|left|200px]]
 
-
<!--
+
==Crystal Structure of apo-mannanase 26A from Psudomonas cellulosa==
-
The line below this paragraph, containing "STRUCTURE_1r7o", creates the "Structure Box" on the page.
+
<StructureSection load='1r7o' size='340' side='right'caption='[[1r7o]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1r7o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R7O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R7O FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1r7o| PDB=1r7o | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r7o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r7o OCA], [https://pdbe.org/1r7o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r7o RCSB], [https://www.ebi.ac.uk/pdbsum/1r7o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r7o ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MANA_CELJU MANA_CELJU] Hydrolyzes mannan and galactomannan, but displays little activity towards other polysaccharides located in the plant cell wall. Appears to act in synergy with alpha-galactosidase (AgaA) to elicit hydrolysis of galactomannan. Preferentially hydrolyzes the larger oligosaccharides and has greater activity against non-substituted polysaccharides.<ref>PMID:7848261</ref> <ref>PMID:11064195</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r7/1r7o_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r7o ConSurf].
 +
<div style="clear:both"></div>
-
'''Crystal Structure of apo-mannanase 26A from Psudomonas cellulosa'''
+
==See Also==
-
 
+
*[[Mannosidase 3D structures|Mannosidase 3D structures]]
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
1R7O is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Cellvibrio_japonicus Cellvibrio japonicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R7O OCA].
+
__TOC__
 +
</StructureSection>
[[Category: Cellvibrio japonicus]]
[[Category: Cellvibrio japonicus]]
-
[[Category: Mannan endo-1,4-beta-mannosidase]]
+
[[Category: Large Structures]]
-
[[Category: Single protein]]
+
[[Category: Oakley AJ]]
-
[[Category: Oakley, A J.]]
+
[[Category: Wilce MCJ]]
-
[[Category: Wilce, M C.J.]]
+
-
[[Category: Endo beta1-4 mannanase]]
+
-
[[Category: Mannan degrading enzyme]]
+
-
[[Category: Mannanase 26a]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 07:11:16 2008''
+

Current revision

Crystal Structure of apo-mannanase 26A from Psudomonas cellulosa

PDB ID 1r7o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1r7o"
Personal tools