9b7f
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 9b7f is ON HOLD Authors: Jakoncic, J., Bernstein, H.J., Soares, A.S., Horvat, K. Description: S_SAD structure of HEWL using lossless default compre...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==S_SAD structure of HEWL using lossless default compression== | |
| + | <StructureSection load='9b7f' size='340' side='right'caption='[[9b7f]], [[Resolution|resolution]] 1.65Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[9b7f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9B7F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9B7F FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9b7f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9b7f OCA], [https://pdbe.org/9b7f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9b7f RCSB], [https://www.ebi.ac.uk/pdbsum/9b7f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9b7f ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Structural biology experiments benefit significantly from state-of-the-art synchrotron data collection. One can acquire macromolecular crystallography (MX) diffraction data on large-area photon-counting pixel-array detectors at framing rates exceeding 1000 frames per second, using 200 Gbps network connectivity, or higher when available. In extreme cases this represents a raw data throughput of about 25 GB s(-1), which is nearly impossible to deliver at reasonable cost without compression. Our field has used lossless compression for decades to make such data collection manageable. Many MX beamlines are now fitted with DECTRIS Eiger detectors, all of which are delivered with optimized compression algorithms by default, and they perform well with current framing rates and typical diffraction data. However, better lossless compression algorithms have been developed and are now available to the research community. Here one of the latest and most promising lossless compression algorithms is investigated on a variety of diffraction data like those routinely acquired at state-of-the-art MX beamlines. | ||
| - | + | Investigation of fast and efficient lossless compression algorithms for macromolecular crystallography experiments.,Bernstein HJ, Jakoncic J J Synchrotron Radiat. 2024 Jul 1;31(Pt 4):647-654. doi: , 10.1107/S160057752400359X. Epub 2024 Jun 5. PMID:38838167<ref>PMID:38838167</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: Bernstein | + | <div class="pdbe-citations 9b7f" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: Jakoncic | + | <references/> |
| - | [[Category: | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Gallus gallus]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Bernstein HJ]] | ||
| + | [[Category: Horvat K]] | ||
| + | [[Category: Jakoncic J]] | ||
| + | [[Category: Soares AS]] | ||
Current revision
S_SAD structure of HEWL using lossless default compression
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