8z2w

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(New page: '''Unreleased structure''' The entry 8z2w is ON HOLD until Paper Publication Authors: Description: Category: Unreleased Structures)
Current revision (08:12, 6 November 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 8z2w is ON HOLD until Paper Publication
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==Crystal structure of apo- exo-beta-(1,3)-glucanase from Aspergillus oryzae (AoBgl)==
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<StructureSection load='8z2w' size='340' side='right'caption='[[8z2w]], [[Resolution|resolution]] 1.75&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[8z2w]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_oryzae Aspergillus oryzae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8Z2W OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8Z2W FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.75&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1L0T:2-methylpropylphosphonic+acid'>A1L0T</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8z2w FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8z2w OCA], [https://pdbe.org/8z2w PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8z2w RCSB], [https://www.ebi.ac.uk/pdbsum/8z2w PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8z2w ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/EXGA_ASPOR EXGA_ASPOR] Beta-glucanases participate in the metabolism of beta-glucan, the main structural component of the cell wall. It could also function biosynthetically as a transglycosylase (By similarity).<ref>PMID:17420593</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Exo-beta-(1,3)-glucanases are promising enzymes for use in the biofuel industry as they hydrolyse sugars such as laminarin, a major constituent of the algal cell wall. This study reports structural and biochemical characterizations of Aspergillus oryzae exo-beta-(1,3)-glucanase (AoBgl) belonging to the GH5 family. Purified AoBgl hydrolyses beta-(1,3)-glycosidic linkages of the oligosaccharide laminaritriose and the polysaccharide laminarin effectively. We have determined three high-resolution structures of AoBgl: (a) the apo form at 1.75 A, (b) the complexed form with bound cellobiose at 1.73 A and (c) the glucose-bound form at 1.20 A. The crystal structures, molecular dynamics simulation studies and site-directed mutagenesis reveal the mode of substrate binding and interactions at the active site. The results also indicate that AoBgl effectively hydrolyses trisaccharides and higher oligosaccharides. The findings from our structural and biochemical studies would aid in rational engineering efforts to generate superior AoBgl variants and similar GH5 enzymes for their industrial use.
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Authors:
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Crystal structures of Aspergillus oryzae exo-beta-(1,3)-glucanase reveal insights into oligosaccharide binding, recognition, and hydrolysis.,Banerjee B, Kamale CK, Suryawanshi AB, Dasgupta S, Noronha S, Bhaumik P FEBS Lett. 2024 Oct 24. doi: 10.1002/1873-3468.15045. PMID:39448541<ref>PMID:39448541</ref>
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Description:
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[Category: Unreleased Structures]]
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</div>
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<div class="pdbe-citations 8z2w" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Aspergillus oryzae]]
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[[Category: Large Structures]]
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[[Category: Banerjee B]]
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[[Category: Bhaumik P]]
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[[Category: Kamale CK]]
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[[Category: Suryawanshi AB]]

Current revision

Crystal structure of apo- exo-beta-(1,3)-glucanase from Aspergillus oryzae (AoBgl)

PDB ID 8z2w

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