9be3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (15:04, 19 February 2025) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9be3 is ON HOLD until Paper Publication
+
==The pre-condensation state of the dimodular NRPS protein LgrA==
-
 
+
<StructureSection load='9be3' size='340' side='right'caption='[[9be3]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-
Authors:
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[9be3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Brevibacillus_parabrevis Brevibacillus parabrevis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9BE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9BE3 FirstGlance]. <br>
-
Description:
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
-
[[Category: Unreleased Structures]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1AMO:[(3~{R})-4-[[3-[2-(2-azanylethanoylamino)ethylamino]-3-oxidanylidene-propyl]amino]-2,2-dimethyl-3-oxidanyl-4-oxidanylidene-butyl]+dihydrogen+phosphate'>A1AMO</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=JQG:(2~{R})-~{N}-[3-[2-[[(2~{S})-2-formamido-3-methyl-butanoyl]amino]ethylamino]-3-oxidanylidene-propyl]-3,3-dimethyl-2-oxidanyl-4-[oxidanyl-bis(oxidanylidene)-$l^{6}-phosphanyl]oxy-butanamide'>JQG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9be3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9be3 OCA], [https://pdbe.org/9be3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9be3 RCSB], [https://www.ebi.ac.uk/pdbsum/9be3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9be3 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LGRA_BREPA LGRA_BREPA] Activates valine (or leucine, but much less frequently), and then glycine and catalyzes the formation of the peptide bond in the first step of peptide synthesis. This enzyme may also play a role in N-formylation of the first amino acid residue in the synthesized dipeptide.
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Brevibacillus parabrevis]]
 +
[[Category: Large Structures]]
 +
[[Category: Pistofidis A]]
 +
[[Category: Schmeing TM]]

Current revision

The pre-condensation state of the dimodular NRPS protein LgrA

PDB ID 9be3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools