This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


HIF1A

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (21:38, 1 June 2024) (edit) (undo)
 
(3 intermediate revisions not shown.)
Line 6: Line 6:
== Introduction ==
== Introduction ==
-
== Structure==
+
HIF1α is a subunit of the transcription factor HIF1, together with HIF1β. HIF1α is part exclusively of HIF1 whilst HIF1β is part of other transcription factors as well as HIF1.
 +
HIF1 is related to glucose metabolism and it was first described in hypoxia conditions, but it is now known that it can be activated also in normoxia situations, acting especially in the polarization of immune cells to more inflammatory phenotypes.
 +
 
 +
== Structure ==
 +
 
 +
The N-terminal region of HIF1α contains a basic helix-loop-helix (bHLH) structure and a PERARNT-SIM (PAS) domain that are responsible for dimerization with HIF1β and interaction with the hypoxia responsive elements (HRE) [5’-(G/C/T)-ACGTGC- (G/T)-3’] present in many enhancers regions of different genes. HIF1α also contains a transactivation domain (TAD) that interacts with CREB binding protein (CBP) and p300, transcription co-activators. TAD can suffer hydroxylation that inhibits the interaction between these co-activating factors and marks the subunit to ubiquitination and consequently degradation in the proteasome.
 +
 
 +
A região N-terminal de HIF1α contém uma região de helix-loop-helix básica (bHLH) e um domínio PAS (PERARNT-SIM) que são responsáveis pela dimerização com HIF1β e interação com DNA.
 +
HIF-1 reconhece o elemento responsivo a hipóxia (HRE) [5’-(G/C/T)-ACGTGC- (G/T)-3’] presente nos enhancers de muitos genes.
 +
A subunidade HIF1α contém dois domínios TAD (transactivation domain) que interagem com CBP (CREB binding protein) e p300, co-ativadores de transcrição na região C-terminal do TAD (CTAD). Essa região sofre hidroxilação o que impede a interação entre os fatores de co-ativação e também marca a subunidade para ubiquitinação e consequente degradação pelo proteassoma.
 +
 
== Function ==
== Function ==

Current revision

Your Heading Here (maybe something like 'Structure')

Caption for this structure

Drag the structure with the mouse to rotate

References

  1. Hanson, R. M., Prilusky, J., Renjian, Z., Nakane, T. and Sussman, J. L. (2013), JSmol and the Next-Generation Web-Based Representation of 3D Molecular Structure as Applied to Proteopedia. Isr. J. Chem., 53:207-216. doi:http://dx.doi.org/10.1002/ijch.201300024
  2. Herraez A. Biomolecules in the computer: Jmol to the rescue. Biochem Mol Biol Educ. 2006 Jul;34(4):255-61. doi: 10.1002/bmb.2006.494034042644. PMID:21638687 doi:10.1002/bmb.2006.494034042644

Proteopedia Page Contributors and Editors (what is this?)

Bruno Prado Eleuterio

Personal tools