8zoi
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 8zoi is ON HOLD Authors: Shen, L.L., Shen, J.R., Wang, W.D. Description: Structure of the astaxanthin mutant PSI-5VCPI supercomplex in Nannochlorop...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Structure of the astaxanthin mutant PSI-5VCPI supercomplex in Nannochloropsis oceanica== | |
| - | + | <StructureSection load='8zoi' size='340' side='right'caption='[[8zoi]], [[Resolution|resolution]] 3.31Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[8zoi]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Nannochloropsis_oceanica_strain_IMET1 Nannochloropsis oceanica strain IMET1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ZOI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ZOI FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.31Å</td></tr> | |
| - | [[Category: | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1L1F:[(2~{Z},4~{E},6~{E},8~{E},10~{E},12~{E},14~{E})-17-[(4~{S},6~{R})-4-acetyloxy-2,2,6-trimethyl-6-oxidanyl-cyclohexylidene]-6,11,15-trimethyl-2-[(~{E})-2-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]ethenyl]heptadeca-2,4,6,8,10,12,14,16-octaenyl]+octanoate'>A1L1F</scene>, <scene name='pdbligand=A1L1G:(1~{R},3~{S})-6-[(3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{Z},17~{E})-16-(hydroxymethyl)-3,7,12-trimethyl-18-[(1~{S},4~{S},6~{R})-2,2,6-trimethyl-4-oxidanyl-7-oxabicyclo[4.1.0]heptan-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenylidene]-1,5,5-trimethyl-cyclohexane-1,3-diol'>A1L1G</scene>, <scene name='pdbligand=BCR:BETA-CAROTENE'>BCR</scene>, <scene name='pdbligand=CLA:CHLOROPHYLL+A'>CLA</scene>, <scene name='pdbligand=DGD:DIGALACTOSYL+DIACYL+GLYCEROL+(DGDG)'>DGD</scene>, <scene name='pdbligand=LHG:1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE'>LHG</scene>, <scene name='pdbligand=LMG:1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE'>LMG</scene>, <scene name='pdbligand=PQN:PHYLLOQUINONE'>PQN</scene>, <scene name='pdbligand=SQD:1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL'>SQD</scene>, <scene name='pdbligand=XAT:(3S,5R,6S,3S,5R,6S)-5,6,5,6-DIEPOXY-5,6,5,6-+TETRAHYDRO-BETA,BETA-CAROTENE-3,3-DIOL'>XAT</scene></td></tr> |
| - | [[Category: | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8zoi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8zoi OCA], [https://pdbe.org/8zoi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8zoi RCSB], [https://www.ebi.ac.uk/pdbsum/8zoi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8zoi ProSAT]</span></td></tr> |
| - | [[Category: | + | </table> |
| - | [[Category: Shen | + | == Function == |
| + | [https://www.uniprot.org/uniprot/T1RJP7_9STRA T1RJP7_9STRA] PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6.[HAMAP-Rule:MF_00458] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Nannochloropsis oceanica strain IMET1]] | ||
| + | [[Category: Shen JR]] | ||
| + | [[Category: Shen LL]] | ||
| + | [[Category: Wang WD]] | ||
Current revision
Structure of the astaxanthin mutant PSI-5VCPI supercomplex in Nannochloropsis oceanica
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