8zp5
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 8zp5 is ON HOLD Authors: Lam, W.H., Yu, D., Dang, S., Zhai, Y. Description: Cryo-EM structure of origin recognition complex (Orc5 basic patch mutat...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Cryo-EM structure of origin recognition complex (Orc5 basic patch mutations) with ARS1 DNA bound== | |
| + | <StructureSection load='8zp5' size='340' side='right'caption='[[8zp5]], [[Resolution|resolution]] 2.98Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[8zp5]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=8ZP5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=8ZP5 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.98Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AGS:PHOSPHOTHIOPHOSPHORIC+ACID-ADENYLATE+ESTER'>AGS</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=8zp5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=8zp5 OCA], [https://pdbe.org/8zp5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=8zp5 RCSB], [https://www.ebi.ac.uk/pdbsum/8zp5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=8zp5 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ORC5_YEAST ORC5_YEAST] Component of the origin recognition complex (ORC) that binds origins of replication. It has a role in both chromosomal replication and mating type transcriptional silencing. Binds to the ARS consensus sequence (ACS) of origins of replication. This subunit is a candidate for the mediation of ATP-dependent binding of ORC to origins. May also be a substrate targeting component of a cullin-RING-based E3 ubiquitin-protein ligase complex RTT101(MMS1-ORC5).<ref>PMID:18006685</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | In eukaryotes, the origin recognition complex (ORC) promotes the assembly of minichromosome maintenance 2 to 7 complexes into a head-to-head double hexamer at origin DNA in a process known as replication licensing. In this study, we present a series of cryoelectron microscopy structures of yeast ORC mutants in complex with origin DNA. We show that Orc6, the smallest subunit of ORC, utilizes its transcription factor II B-B domain to orchestrate the sequential binding of ORC to origin DNA. In addition, Orc6 plays the role of a scaffold by stabilizing the basic patch (BP) of Orc5 for ORC to capture and bend origin DNA. Importantly, disrupting DNA bending through mutating three key residues in Orc5-BP impairs ORC's ability to promote replication initiation at two points during the pre-RC assembly process. This study dissects the multifaceted role of Orc6 in orchestrating ORC's activities on DNA and underscores the vital role of DNA bending by ORC in replication licensing. | ||
| - | + | DNA bending mediated by ORC is essential for replication licensing in budding yeast.,Lam WH, Yu D, Zhang Q, Lin Y, Li N, Li J, Wu Y, Zhang Y, Gao N, Tye BK, Zhai Y, Dang S Proc Natl Acad Sci U S A. 2025 Apr 8;122(14):e2502277122. doi: , 10.1073/pnas.2502277122. Epub 2025 Apr 4. PMID:40184174<ref>PMID:40184174</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 8zp5" style="background-color:#fffaf0;"></div> |
| - | [[Category: | + | == References == |
| - | [[Category: Dang | + | <references/> |
| - | [[Category: Yu | + | __TOC__ |
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Saccharomyces cerevisiae]] | ||
| + | [[Category: Saccharomyces cerevisiae S288C]] | ||
| + | [[Category: Dang S]] | ||
| + | [[Category: Lam WH]] | ||
| + | [[Category: Yu D]] | ||
| + | [[Category: Zhai Y]] | ||
Current revision
Cryo-EM structure of origin recognition complex (Orc5 basic patch mutations) with ARS1 DNA bound
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