9iy1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "9iy1" [edit=sysop:move=sysop])
Current revision (10:36, 30 April 2025) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9iy1 is ON HOLD
+
==P450 BS beta mutant F46A==
 +
<StructureSection load='9iy1' size='340' side='right'caption='[[9iy1]], [[Resolution|resolution]] 2.29&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[9iy1]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9IY1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9IY1 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.29&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PLM:PALMITIC+ACID'>PLM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9iy1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9iy1 OCA], [https://pdbe.org/9iy1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9iy1 RCSB], [https://www.ebi.ac.uk/pdbsum/9iy1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9iy1 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CYPC_BACSU CYPC_BACSU] Catalyzes the alpha- and beta-hydroxylation of myristic acid in the presence of hydrogen peroxide.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Exploring and exploiting the catalytic promiscuity of enzymes is a central topic and captivating challenge in enzymology. CYP152 peroxygenases are attractive biocatalysts for diverse reactions under mild conditions using H2O2 as cofactor. However, their substrate scope is limited by a carboxyl group required for substrate assisted acid-base catalysis, following the well-accepted principle that heme-dependent H2O2-utilizing enzymes employ a carboxyl group within their active sites to facilitate H2O2 activation. Herein, we reveal for the first time that several CYP152 family members can directly degrade various aromatic pollutants without any carboxyl group, exhibiting novel aromatic hydroxylation and dehalogenation activities. Through crystal structure analysis, isotope tracing experiments, and QM/MM calculations, we elucidate that the phenolic hydroxyl group activated by electron-withdrawing substituent(s) functionally replaces the carboxyl group, forming hydrogen bonds with the conserved arginine leading to Compound I formation. The oxygen atom of the newly formed hydroxyl group originates from water, bypassing the conventional oxygen rebound step. These findings provide first insights into the mechanisms of P450 peroxygenases towards non-carboxylic substrates, expanding our knowledge of biological C-H activation and C-halogen bond cleavage beyond canonical P450 reactions. This discovery holds immense potential for harnessing these enzymes in innovative strategies for industrial biocatalysis and environmental remediation.
-
Authors: Gong, P.Q., Gao, X.
+
Unexpected Activities of CYP152 Peroxygenases towards Non-carboxylic Substrates Reveal Novel Substrate Recognition Mechanism and Catalytic Versatility.,Jiang Y, Gong P, Li Z, Li Z, Li Y, Wang B, Huang H, Peng W, Gao X, Li S Angew Chem Int Ed Engl. 2025 Apr 19:e202506614. doi: 10.1002/anie.202506614. PMID:40252015<ref>PMID:40252015</ref>
-
Description: P450 BS beta mutant F46A
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Gong, P.Q]]
+
<div class="pdbe-citations 9iy1" style="background-color:#fffaf0;"></div>
-
[[Category: Gao, X]]
+
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
 +
[[Category: Large Structures]]
 +
[[Category: Gao X]]
 +
[[Category: Gong PQ]]

Current revision

P450 BS beta mutant F46A

PDB ID 9iy1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools