9d82
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 9d82 is ON HOLD Authors: Subramanian, S., Bergland Drarvik, S.M., Parent, K.N. Description: Shigella flexneri bacteriophage B2 Icosahedral Reconstr...) |
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| - | '''Unreleased structure''' | ||
| - | + | ==Shigella flexneri bacteriophage B2 Icosahedral Reconstruction== | |
| + | <StructureSection load='9d82' size='340' side='right'caption='[[9d82]], [[Resolution|resolution]] 3.30Å' scene=''> | ||
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[9d82]] is a 18 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_phage_B2 Shigella phage B2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9D82 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9D82 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.3Å</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9d82 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9d82 OCA], [https://pdbe.org/9d82 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9d82 RCSB], [https://www.ebi.ac.uk/pdbsum/9d82 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9d82 ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Podophages are, by far, the least well studied of all the bacteriophages. Despite being classified together due to their short, noncontractile tails, there is a huge amount of diversity among members of this group. Of the podophages, the N4-like Schitoviridae family is the least well studied structurally and is quite divergent from well-characterized podophages such as T7 and P22. In this work, we isolate and fully characterize two members of the Schitoviridae family by cryo-electron microscopy, genetics, and biochemistry. We describe the capsid features of Moo19 and B2, including a decoration protein. In addition, we have fully modeled the tail machinery for both phages and identify proteins with esterase activity. Genetic knockouts of the host reveal factors specific for host attachment including key modifications to the O-antigen on the lipopolysaccharide. Moo19 and B2 are both Schitoviridae members, yet some distinct differences in the genome and structure place them into distinct clades. | ||
| - | + | Moo19 and B2: Structures of Schitoviridae podophages with T = 9 geometry and tailspikes with esterase activity.,Subramanian S, Bergland Drarvik SM, Tinney KR, Doore SM, Parent KN Sci Adv. 2024 Dec 20;10(51):eadt0022. doi: 10.1126/sciadv.adt0022. Epub 2024 Dec , 18. PMID:39693418<ref>PMID:39693418</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | [[Category: | + | </div> |
| - | [[Category: | + | <div class="pdbe-citations 9d82" style="background-color:#fffaf0;"></div> |
| - | [[Category: Parent | + | == References == |
| - | [[Category: | + | <references/> |
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Shigella phage B2]] | ||
| + | [[Category: Bergland Drarvik SM]] | ||
| + | [[Category: Parent KN]] | ||
| + | [[Category: Subramanian S]] | ||
Current revision
Shigella flexneri bacteriophage B2 Icosahedral Reconstruction
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