9gmx

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Current revision (20:12, 11 December 2024) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9gmx is ON HOLD until Paper Publication
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==SLFN11 WT dimer bound to tRNA-Leu-TAA (post-cleavage state)==
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<StructureSection load='9gmx' size='340' side='right'caption='[[9gmx]], [[Resolution|resolution]] 2.82&Aring;' scene=''>
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Authors:
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9gmx]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9GMX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9GMX FirstGlance]. <br>
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Description:
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.82&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9gmx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9gmx OCA], [https://pdbe.org/9gmx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9gmx RCSB], [https://www.ebi.ac.uk/pdbsum/9gmx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9gmx ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/SLN11_HUMAN SLN11_HUMAN] Inhibitor of DNA replication that promotes cell death in response to DNA damage (PubMed:22927417, PubMed:26658330, PubMed:29395061). Acts as a guardian of the genome by killing cells with defective replication (PubMed:29395061). Persistently blocks stressed replication forks by opening chromatin across replication initiation sites at stressed replication forks, possibly leading to unwind DNA ahead of the MCM helicase and block fork progression, ultimately leading to cell death (PubMed:29395061). Upon DNA damage, inhibits translation of ATR or ATM based on distinct codon usage without disrupting early DNA damage response signaling (PubMed:30374083). Antiviral restriction factor with manganese-dependent type II tRNA endoribonuclease (PubMed:36115853). A single tRNA molecule is bound and cleaved by the SLFN11 dimer (PubMed:36115853). Specifically abrogates the production of retroviruses such as human immunodeficiency virus 1 (HIV-1) by acting as a specific inhibitor of the synthesis of retroviruses encoded proteins in a codon-usage-dependent manner (PubMed:23000900). Impairs the replication of human cytomegalovirus (HCMV) and some Flaviviruses (PubMed:35105802, PubMed:36115853). Exploits the unique viral codon bias towards A/T nucleotides (PubMed:23000900). Also acts as an interferon (IFN)-induced antiviral protein which acts as an inhibitor of retrovirus protein synthesis (PubMed:23000900).<ref>PMID:22927417</ref> <ref>PMID:23000900</ref> <ref>PMID:26658330</ref> <ref>PMID:29395061</ref> <ref>PMID:30374083</ref> <ref>PMID:35105802</ref> <ref>PMID:36115853</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Homo sapiens]]
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[[Category: Large Structures]]
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[[Category: Kugler M]]
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[[Category: Lammens K]]
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[[Category: Metzner FJ]]

Current revision

SLFN11 WT dimer bound to tRNA-Leu-TAA (post-cleavage state)

PDB ID 9gmx

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