This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1u6l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:14, 9 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1u6l.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of protein PA1353 from Pseudomonas aeruginosa==
-
The line below this paragraph, containing "STRUCTURE_1u6l", creates the "Structure Box" on the page.
+
<StructureSection load='1u6l' size='340' side='right'caption='[[1u6l]], [[Resolution|resolution]] 2.81&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1u6l]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_PAO1 Pseudomonas aeruginosa PAO1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U6L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U6L FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.81&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1u6l| PDB=1u6l | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u6l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u6l OCA], [https://pdbe.org/1u6l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u6l RCSB], [https://www.ebi.ac.uk/pdbsum/1u6l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u6l ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1u6l TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of protein PA1353 from Pseudomonas aeruginosa'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q9I3Z1_PSEAE Q9I3Z1_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1U6L is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U6L OCA].
+
Check<jmol>
-
[[Category: Pseudomonas aeruginosa pao1]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u6/1u6l_consurf.spt"</scriptWhenChecked>
-
[[Category: Burley, S K.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Min, T.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Mu, H.]]
+
</jmolCheckbox>
-
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u6l ConSurf].
-
[[Category: Shapiro, L.]]
+
<div style="clear:both"></div>
-
[[Category: Hypothetical protein]]
+
__TOC__
-
[[Category: New york structural genomix research consortium]]
+
</StructureSection>
-
[[Category: Nysgxrc]]
+
[[Category: Large Structures]]
-
[[Category: Protein structure initiative]]
+
[[Category: Pseudomonas aeruginosa PAO1]]
-
[[Category: Psi]]
+
[[Category: Burley SK]]
-
[[Category: Structural genomic]]
+
[[Category: Min T]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 10:49:22 2008''
+
[[Category: Mu H]]
 +
[[Category: Shapiro L]]

Current revision

Crystal structure of protein PA1353 from Pseudomonas aeruginosa

PDB ID 1u6l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1u6l"
Personal tools