User:Jaime Prilusky/JSmolExtension

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(→A few examples of supported tags using [http://proteopedia.org/wiki/support/JSmolExtension/JmolExtension_604.zip JmolExtension_604.zip])
Current revision (04:55, 24 February 2025) (edit) (undo)
 
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<div style='background-color:#66FF66;padding:5px;'>
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* [[User:Jaime_Prilusky/JSmolExtension/Simple Tags|Simple Tags]]
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== A few examples of supported tags using JmolExtension_604 ==
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* [[User:Jaime_Prilusky/JSmolExtension/Tags for In-page Models|Tags for In-page Models]]
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* [[User:Jaime_Prilusky/JSmolExtension/Tags_for_Controls|Tags for Controls]]
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* Download the file [http://proteopedia.org/wiki/support/JSmolExtension/JmolExtension_604.zip JmolExtension_604.zip]
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<!-- * [[User:Jaime_Prilusky/JSmolExtension/Tags for Pop-in Models|Tags for Pop-in Models]] -->
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* Expand this .zip in the extensions folder of your wiki. It will create the folder Jmol/.
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* [[User:Jaime_Prilusky/JSmolExtension/Tags for Pop-up Models|Tags for Pop-up Models]]
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* Add to the LocalSettings.php a line wfLoadExtension( 'Jmol' );
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* [[User:Jaime_Prilusky/JSmolExtension/Demo|Demo]]
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</div>
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Some [[User:Jaime Prilusky/Test/JSmolExtensionExamples|more examples]]
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== JSmol applet in the same page ==
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<jmol><jmolApplet>
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<title> wikiPageContents </title>
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<float>right</float>
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<color>red</color><size>200</size>
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<uploadedFileContents>chair.xyz</uploadedFileContents>
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<pspeed>2</pspeed>
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<caption>Some caption here, enabled for wikitext, i.e double square brackets [[3rec]]</caption>
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<controls>spin popup</controls>
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<animgifurl>http://proteopedia.org/wiki/images/8/8d/2cts.gif</animgifurl>
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</jmolApplet></jmol>
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<pre>The applet on the right is generated from this code
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<jmol><jmolApplet>
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<title> wikiPageContents </title>
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<float>right</float>
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<color>red</color><size>200</size>
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<uploadedFileContents>chair.xyz</uploadedFileContents>
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<pspeed>2</pspeed>
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<caption>Some caption here, enabled for wikitext, i.e double square brackets [[3rec]]</caption>
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<controls>spin popup</controls>
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<animgifurl>http://proteopedia.org/wiki/images/8/8d/2cts.gif</animgifurl>
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</jmolApplet></jmol>
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</pre>
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* &lt;caption> Text displayed below the applet
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* &lt;captioncss> CSS style for Caption
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* &lt;color> Applet background colour
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* &lt;controls> Draws control buttons [ all | spin | quality | popup ]
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* &lt;float> [ left | right ]
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* &lt;frame> true: draws frame around applet
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* &lt;pspeed> Platform speed for applet [ 1 .. 8 ]
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* &lt;script> Jmol script, i.e. ''load $NC(Cl)(C)O;''
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* &lt;size> Applet side in pixels
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* &lt;title> Text displayed on top of the applet
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* &lt;titlecss> CSS style for Title
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* &lt;animgifurl> URL for animated GIF to display before rendering the model
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* &lt;uploadedfilecontents> renders uploaded structure
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* &lt;urlcontents> renders structure from URL
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* &lt;wikipagecontents> renders content from wiki page
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== JSmol applet in a popup window ==
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'''jmolFile''' <nowiki><jmolFile text="Explanatory text for link">Chair.xyz</jmolFile></nowiki >
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... 'and what is the use of a book,' thought Alice 'without <jmolFile text="pictures">Chair.xyz</jmolFile> or conversation?'
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'''jmolSmiles''' <nowiki><jmolSmiles text='nitrobenzene'>c1ccccc1[N+](=O)[O-]</jmolSmiles></nowiki>
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Both versions, using the target as a link or using an alternate text, are supported:
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<jmolSmiles text='nitrobenzene'>c1ccccc1[N+](=O)[O-]</jmolSmiles>
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and
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<jmolSmiles>c1ccccc1[N+](=O)[O-]</jmolSmiles>
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'''jmolAppletButton'''
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<jmol>
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<jmolAppletButton>
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<uploadedFileContents>Chair.xyz</uploadedFileContents>
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<text>show Chair</text>
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</jmolAppletButton>
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</jmol>
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'''jmolPdb''' <nowiki><jmolPdb>3rec</jmolPdb></nowiki> <jmolPdb>3rec</jmolPdb>
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<!--
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<jmol>
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<jmolApplet>
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<signed>true</signed>
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<title>SMILES samples</title>
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<size>200</size>
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<script>load $NC(Cl)(C)O</script>
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</jmolApplet>
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<jmolMenu>
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<item>
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<script></script>
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<text>..choose..</text>
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</item>
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<item>
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<script>load $CCC(C)C</script>
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<text>CCC(C)C</text>
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</item>
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<item>
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<script>load $NC(C)C(O)=O</script>
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<text>NC(C)C(O)=O</text>
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</item>
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<item>
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<script>load $c1ccccc1</script>
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<text>c1ccccc1</text>
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</item>
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</jmolMenu>
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</jmol>
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-->
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Current revision

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Jaime Prilusky

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