9hu1

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:27, 3 September 2025) (edit) (undo)
 
(One intermediate revision not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 9hu1 is ON HOLD
+
==SSX structure of cytochrome c prime beta from Methylococcus capsulatus (Bath)==
 +
<StructureSection load='9hu1' size='340' side='right'caption='[[9hu1]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[9hu1]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methylococcus_capsulatus_str._Bath Methylococcus capsulatus str. Bath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9HU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9HU1 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.151&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9hu1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9hu1 OCA], [https://pdbe.org/9hu1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9hu1 RCSB], [https://www.ebi.ac.uk/pdbsum/9hu1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9hu1 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/G1UBD5_METCA G1UBD5_METCA]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Time-resolved X-ray crystallography is undergoing a renaissance due to the development of serial crystallography at synchrotron and XFEL beamlines. Crucial to such experiments are efficient and effective methods for uniformly initiating time-dependent processes within microcrystals, such as ligand binding, enzymatic reactions or signalling. A widely applicable approach is the use of photocaged substrates, where the photocage is soaked into the crystal in advance and then activated using a laser pulse to provide uniform initiation of the reaction throughout the crystal. This work characterizes photocage release of nitric oxide and binding of this ligand to two heme protein systems, cytochrome c'-beta and dye-decolourizing peroxidase B using a fixed target sample delivery system. Laser parameters for photoactivation are systematically explored, and time-resolved structures over timescales ranging from 100 micros to 1.4 s using synchrotron and XFEL beamlines are described. The effective use of this photocage for time-resolved crystallography is demonstrated and appropriate illumination conditions for such experiments are determined.
-
Authors: Smyth, P., Williams, L.J., Hough, M.A., Worrall, J.A.R., Owen, R.L.
+
Time-resolved serial synchrotron and serial femtosecond crystallography of heme proteins using photocaged nitric oxide.,Smyth P, Jaho S, Williams LJ, Karras G, Fitzpatrick A, Thompson AJ, Battah S, Axford D, Horrell S, Lucic M, Ishihara K, Kataoka M, Matsuura H, Shimba K, Tono K, Tosha T, Sugimoto H, Owada S, Hough MA, Worrall JAR, Owen RL IUCrJ. 2025 Sep 1;12(Pt 5):582-594. doi: 10.1107/S2052252525006645. PMID:40843530<ref>PMID:40843530</ref>
-
Description: SSX structure of cytochrome c prime beta from Methylococcus capsulatus (Bath)
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
[[Category: Unreleased Structures]]
+
</div>
-
[[Category: Hough, M.A]]
+
<div class="pdbe-citations 9hu1" style="background-color:#fffaf0;"></div>
-
[[Category: Smyth, P]]
+
== References ==
-
[[Category: Worrall, J.A.R]]
+
<references/>
-
[[Category: Owen, R.L]]
+
__TOC__
-
[[Category: Williams, L.J]]
+
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Methylococcus capsulatus str. Bath]]
 +
[[Category: Hough MA]]
 +
[[Category: Owen RL]]
 +
[[Category: Smyth P]]
 +
[[Category: Williams LJ]]
 +
[[Category: Worrall JAR]]

Current revision

SSX structure of cytochrome c prime beta from Methylococcus capsulatus (Bath)

PDB ID 9hu1

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools