1w8i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:41, 23 October 2024) (edit) (undo)
 
(13 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1w8i.jpg|left|200px]]
 
-
<!--
+
==The Structure of gene product af1683 from Archaeoglobus fulgidus.==
-
The line below this paragraph, containing "STRUCTURE_1w8i", creates the "Structure Box" on the page.
+
<StructureSection load='1w8i' size='340' side='right'caption='[[1w8i]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1w8i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Archaeoglobus_fulgidus_DSM_4304 Archaeoglobus fulgidus DSM 4304]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1W8I FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1w8i| PDB=1w8i | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1w8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1w8i OCA], [https://pdbe.org/1w8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1w8i RCSB], [https://www.ebi.ac.uk/pdbsum/1w8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1w8i ProSAT], [https://www.topsan.org/Proteins/MCSG/1w8i TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''THE STRUCTURE OF GENE PRODUCT AF1683 FROM ARCHAEOGLOBUS FULGIDUS.'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Y1683_ARCFU Y1683_ARCFU] Toxic component of a type II toxin-antitoxin (TA) system. An RNase.[HAMAP-Rule:MF_00265]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
1W8I is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Archaeoglobus_fulgidus Archaeoglobus fulgidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W8I OCA].
+
Check<jmol>
-
[[Category: Archaeoglobus fulgidus]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w8/1w8i_consurf.spt"</scriptWhenChecked>
-
[[Category: Cuff, M E.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Edwards, A.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Ginell, S L.]]
+
</jmolCheckbox>
-
[[Category: Joachimiak, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1w8i ConSurf].
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
<div style="clear:both"></div>
-
[[Category: Savchenko, A.]]
+
__TOC__
-
[[Category: Xu, X.]]
+
</StructureSection>
-
[[Category: Zhang, R.]]
+
[[Category: Archaeoglobus fulgidus DSM 4304]]
-
[[Category: Archaeoglobus fulgidus]]
+
[[Category: Large Structures]]
-
[[Category: Hypothetical protein,psi,protein structure initiative]]
+
[[Category: Cuff ME]]
-
[[Category: Mcsg,midwest center for structural genomic]]
+
[[Category: Edwards A]]
-
[[Category: Structural genomic]]
+
[[Category: Ginell SL]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 13:18:13 2008''
+
[[Category: Joachimiak A]]
 +
[[Category: Savchenko A]]
 +
[[Category: Xu X]]
 +
[[Category: Zhang R]]

Current revision

The Structure of gene product af1683 from Archaeoglobus fulgidus.

PDB ID 1w8i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools