9w4m

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(New page: '''Unreleased structure''' The entry 9w4m is ON HOLD Authors: Gao, Y.H., Li, Z.X. Description: ratTRPV1 bound with antagonist AMG517 Category: Unreleased Structures [[Category: Gao...)
Current revision (06:37, 26 November 2025) (edit) (undo)
 
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'''Unreleased structure'''
 
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The entry 9w4m is ON HOLD
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==ratTRPV1 bound with antagonist AMG517==
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<StructureSection load='9w4m' size='340' side='right'caption='[[9w4m]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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Authors: Gao, Y.H., Li, Z.X.
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== Structural highlights ==
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<table><tr><td colspan='2'>[[9w4m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12] and [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=9W4M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=9W4M FirstGlance]. <br>
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Description: ratTRPV1 bound with antagonist AMG517
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
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[[Category: Unreleased Structures]]
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A1D6R:~{N}-[4-[6-[4-(trifluoromethyl)phenyl]pyrimidin-4-yl]oxy-1,3-benzothiazol-2-yl]ethanamide'>A1D6R</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
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[[Category: Gao, Y.H]]
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=9w4m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=9w4m OCA], [https://pdbe.org/9w4m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=9w4m RCSB], [https://www.ebi.ac.uk/pdbsum/9w4m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=9w4m ProSAT]</span></td></tr>
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[[Category: Li, Z.X]]
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/MALE_ECOLI MALE_ECOLI] Involved in the high-affinity maltose membrane transport system MalEFGK. Initial receptor for the active transport of and chemotaxis toward maltooligosaccharides.[https://www.uniprot.org/uniprot/TRPV1_RAT TRPV1_RAT] Receptor-activated non-selective calcium permeant cation channel involved in detection of noxious chemical and thermal stimuli. Seems to mediate proton influx and may be involved in intracellular acidosis in nociceptive neurons. May be involved in mediation of inflammatory pain and hyperalgesia. Sensitized by a phosphatidylinositol second messenger system activated by receptor tyrosine kinases, which involves PKC isozymes and PCL. Activation by vanilloids, like capsaicin, and temperatures higher than 42 degrees Celsius, exhibits a time- and Ca(2+)-dependent outward rectification, followed by a long-lasting refractory state. Mild extracellular acidic pH (6.5) potentiates channel activation by noxious heat and vanilloids, whereas acidic conditions (pH <6) directly activate the channel. Can be activated by endogenous compounds, including 12-hydroperoxytetraenoic acid and bradykinin. Acts as ionotropic endocannabinoid receptor with central neuromodulatory effects. Triggers a form of long-term depression (TRPV1-LTD) mediated by the endocannabinoid anandamine in the hippocampus and nucleus accumbens by affecting AMPA receptors endocytosis.<ref>PMID:9349813</ref> <ref>PMID:10644739</ref> <ref>PMID:11140687</ref> <ref>PMID:11418861</ref> <ref>PMID:12095983</ref> <ref>PMID:12194871</ref> <ref>PMID:12808128</ref> <ref>PMID:14523239</ref> <ref>PMID:12764195</ref> <ref>PMID:14630912</ref> <ref>PMID:15173182</ref> <ref>PMID:21076423</ref>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Escherichia coli K-12]]
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[[Category: Large Structures]]
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[[Category: Rattus norvegicus]]
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[[Category: Gao YH]]
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[[Category: Li ZX]]

Current revision

ratTRPV1 bound with antagonist AMG517

PDB ID 9w4m

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