This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2ab6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /> <applet load="2ab6" size="450" color="white" frame="true" align="right" spinBox="true" caption="2ab6, resolution 2.50&Aring;" /> '''HUMAN GLUTATHIONE S...)
Current revision (07:22, 23 August 2023) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2ab6.gif|left|200px]]<br />
 
-
<applet load="2ab6" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2ab6, resolution 2.50&Aring;" />
 
-
'''HUMAN GLUTATHIONE S-TRANSFERASE M2-2 (E.C.2.5.1.18) complexed with S-METHYLGLUTATHIONE'''<br />
 
-
==Overview==
+
==HUMAN GLUTATHIONE S-TRANSFERASE M2-2 (E.C.2.5.1.18) complexed with S-METHYLGLUTATHIONE==
-
Human glutathione-S-transferase M2-2 (hGSTM2-2) was expressed in, Escherichia coli and purified by GSH-affinity chromatography. The, recombinant enzyme and the protein isolated from human tissue were, indistinguishable based on physicochemical, enzymatic and immunological, criteria. The catalytically active dimeric hGSTM2-2 was crystallized, without GSH or other active-site ligands in two crystal forms. Diffraction, from form A crystals extends to 2.5 A and is consistent with the space, group P21 (a = 53.9, b = 81.5, c = 55.6 A, beta = 109.26 A) with two, monomers in the asymmetric unit. Diffraction from form B crystals extends, to 3 A and is consistent with a space group P212121 (a = 57.2, b = 80.7, c, = 225.9 A) with two dimers in the asymmetric unit. This is the first, report of ligand-free mu-class GST crystals, and a comparison with, liganded complexes will provide insight into the structural consequences, of substrate binding which are thought to be important for catalysis.
+
<StructureSection load='2ab6' size='340' side='right'caption='[[2ab6]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2ab6]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AB6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AB6 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GSM:L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE'>GSM</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ab6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ab6 OCA], [https://pdbe.org/2ab6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ab6 RCSB], [https://www.ebi.ac.uk/pdbsum/2ab6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ab6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/GSTM2_HUMAN GSTM2_HUMAN] Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles.<ref>PMID:16549767</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ab/2ab6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ab6 ConSurf].
 +
<div style="clear:both"></div>
-
==About this Structure==
+
==See Also==
-
2AB6 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with GSM as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Glutathione_transferase Glutathione transferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.5.1.18 2.5.1.18] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2AB6 OCA].
+
*[[Glutathione S-transferase 3D structures|Glutathione S-transferase 3D structures]]
-
 
+
== References ==
-
==Reference==
+
<references/>
-
Expression, crystallization and preliminary X-ray analysis of ligand-free human glutathione S-transferase M2-2., Patskovska LN, Fedorov AA, Patskovsky YV, Almo SC, Listowsky I, Acta Crystallogr D Biol Crystallogr. 1998 May 1;54(Pt 3):458-60. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=9761928 9761928]
+
__TOC__
-
[[Category: Glutathione transferase]]
+
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Almo, S.C.]]
+
[[Category: Almo SC]]
-
[[Category: Listowsky, I.]]
+
[[Category: Listowsky I]]
-
[[Category: Patskovsky, Y.]]
+
[[Category: Patskovsky Y]]
-
[[Category: GSM]]
+
-
[[Category: conjugation]]
+
-
[[Category: detoxification]]
+
-
[[Category: s-methylglutathione]]
+
-
[[Category: transferase]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 20:48:22 2007''
+

Current revision

HUMAN GLUTATHIONE S-TRANSFERASE M2-2 (E.C.2.5.1.18) complexed with S-METHYLGLUTATHIONE

PDB ID 2ab6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools