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Template:STRUCTURE 1y3g

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m (Protected "Template:STRUCTURE 1y3g" [edit=sysop:move=sysop])
Current revision (17:48, 25 July 2012) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 1y3g, resolution 2.10&Aring; (<scene name='initialview01'>initial scene</scene>)
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[1y3g]], [[Resolution|resolution]] 2.10&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|SITE=
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|LIGAND= <scene name='pdbligand=3PL:3-PHENYLPROPANAL'>3PL</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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|LIGAND= <scene name='pdbligand=3PL:3-PHENYLPROPANAL'>3PL</scene>, <scene name='pdbligand=AMM:(2S)-2-{[(AMINOMETHYL)(DIHYDROXY)SILYL]METHYL}-4-METHYLPENTANAL'>AMM</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thermolysin Thermolysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.27 3.4.24.27] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Thermolysin Thermolysin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.24.27 3.4.24.27] </span>
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|GENE=
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|NONSTDRES=<scene name='pdbligand=AMM:(2S)-2-{[(AMINOMETHYL)(DIHYDROXY)SILYL]METHYL}-4-METHYLPENTANAL'>AMM</scene>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam02868 Peptidase_M4_C], [http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam01447 Peptidase_M4]</span>
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y3g OCA], [http://www.ebi.ac.uk/pdbsum/1y3g PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1y3g RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1y3g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y3g OCA], [http://www.ebi.ac.uk/pdbsum/1y3g PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=1y3g RCSB]</span>
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|FUNCTION={{GO|id=GO:0016787 | text = hydrolase activity}}{{GO|id=GO:0004222 | text = metalloendopeptidase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0005509 | text = calcium ion binding}}{{GO|id=GO:0008237 | text = metallopeptidase activity}}{{GO|id=GO:0008233 | text = peptidase activity}}
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|PROCESS={{GO|id=GO:0006508 | text = proteolysis}}
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|COMPONENT={{GO|id=GO:0005576 | text = extracellular region}}
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|SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1y3gE02 1Y3Ge02], [http://www.cathdb.info/cgi-bin/cath/Domain.pl?domain_id=1y3gE01 1Y3Ge01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013832 Ipr013832], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR006025 Ipr006025], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013856 Ipr013856], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011096 Ipr011096], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001570 Ipr001570], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR005075 Ipr005075]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF01447 PF01447], [http://pfam.sanger.ac.uk/family?acc=PF02868 PF02868]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00800 P00800]</span>
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|uPDB=1Y3G|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
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<jmolButton>
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<script></script>
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<text>A [x]</text>
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<name>jmb_1y3g_A</name>
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<title>toggle chain A</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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}}
}}

Current revision

Drag the structure with the mouse to rotate
1y3g, resolution 2.10Å ()
Ligands: , , ,
Non-Standard Residues:
Activity: Thermolysin, with EC number 3.4.24.27
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


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