205d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:07, 14 February 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:205d.jpg|left|200px]]
 
-
<!--
+
==STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP==
-
The line below this paragraph, containing "STRUCTURE_205d", creates the "Structure Box" on the page.
+
<StructureSection load='205d' size='340' side='right'caption='[[205d]], [[Resolution|resolution]] 2.64&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[205d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=205D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=205D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.64&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=205d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=205d OCA], [https://pdbe.org/205d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=205d RCSB], [https://www.ebi.ac.uk/pdbsum/205d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=205d ProSAT]</span></td></tr>
-
{{STRUCTURE_205d| PDB=205d | SCENE= }}
+
</table>
-
 
+
__TOC__
-
'''STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP'''
+
</StructureSection>
-
 
+
[[Category: Large Structures]]
-
 
+
[[Category: Baeyens KJ]]
-
==Overview==
+
[[Category: De Bondt HL]]
-
The crystal structure of the RNA dodecamer 5'-GGACUUUGGUCC-3' has been determined from X-ray diffraction data to 2.6 A resolution. This oligomer forms an asymmetric double helix in the crystal. Four consecutive non-Watson-Crick base-pairs are formed in the middle of the duplex including the first intrahelical U-U (or T-T) pairs observed in an oligonucleotide crystal structure. Two different conformations of U-U pairs are observed in the context of the surrounding sequence. One of these pairs is highly twisted, allowing a bound water to bridge across strands in the major groove. The crystal packing illustrates a new form of RNA helix-helix interaction.
+
[[Category: Holbrook SR]]
-
 
+
-
==About this Structure==
+
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=205D OCA].
+
-
 
+
-
==Reference==
+
-
Structure of an RNA double helix including uracil-uracil base pairs in an internal loop., Baeyens KJ, De Bondt HL, Holbrook SR, Nat Struct Biol. 1995 Jan;2(1):56-62. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/7719854 7719854]
+
-
[[Category: Baeyens, K J.]]
+
-
[[Category: Bondt, H L.De.]]
+
-
[[Category: Holbrook, S R.]]
+
-
[[Category: A-rna]]
+
-
[[Category: Double helix]]
+
-
[[Category: Internal loop]]
+
-
[[Category: Mismatched]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 18:17:54 2008''
+

Current revision

STRUCTURE OF AN RNA DOUBLE HELIX INCLUDING URACIL-URACIL BASE PAIRS IN AN INTERNAL LOOP

PDB ID 205d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/205d"
Personal tools