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2dfd
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="2dfd" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dfd, resolution 1.90Å" /> '''Crystal Structure o...) |
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| - | [[Image:2dfd.gif|left|200px]]<br /> | ||
| - | <applet load="2dfd" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2dfd, resolution 1.90Å" /> | ||
| - | '''Crystal Structure of Human Malate Dehydrogenase Type 2'''<br /> | ||
| - | == | + | ==Crystal Structure of Human Malate Dehydrogenase Type 2== |
| - | + | <StructureSection load='2dfd' size='340' side='right'caption='[[2dfd]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | [ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2dfd]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DFD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DFD FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9Å</td></tr> |
| - | [[ | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ALA:ALANINE'>ALA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=HIS:HISTIDINE'>HIS</scene>, <scene name='pdbligand=MLT:D-MALATE'>MLT</scene>, <scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dfd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dfd OCA], [https://pdbe.org/2dfd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dfd RCSB], [https://www.ebi.ac.uk/pdbsum/2dfd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dfd ProSAT]</span></td></tr> | |
| - | + | </table> | |
| - | + | == Function == | |
| - | [ | + | [https://www.uniprot.org/uniprot/MDHM_HUMAN MDHM_HUMAN] |
| - | [ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | [ | + | Check<jmol> |
| - | + | <jmolCheckbox> | |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/df/2dfd_consurf.spt"</scriptWhenChecked> |
| - | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [ | + | </jmolCheckbox> |
| - | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dfd ConSurf]. | |
| - | [[ | + | <div style="clear:both"></div> |
| - | + | ||
| - | [ | + | |
| - | [[ | + | |
| - | + | ||
| - | + | ||
| - | + | ==See Also== | |
| + | *[[Malate Dehydrogenase 3D structures|Malate Dehydrogenase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Arrowsmith C]] | ||
| + | [[Category: Edwards A]] | ||
| + | [[Category: Oppermann U]] | ||
| + | [[Category: Rojkova A]] | ||
| + | [[Category: Shafqat N]] | ||
| + | [[Category: Sundstrom M]] | ||
| + | [[Category: Ugochukwu E]] | ||
| + | [[Category: Weigelt J]] | ||
| + | [[Category: Von Delft F]] | ||
Current revision
Crystal Structure of Human Malate Dehydrogenase Type 2
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