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2dlo

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(New page: 200px<br /> <applet load="2dlo" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dlo" /> '''Solution structure of the second LIM domain...)
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[[Image:2dlo.gif|left|200px]]<br />
 
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<applet load="2dlo" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="2dlo" />
 
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'''Solution structure of the second LIM domain of human Thyroid receptor-interacting protein 6'''<br />
 
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==About this Structure==
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==Solution structure of the second LIM domain of human Thyroid receptor-interacting protein 6==
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2DLO is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] with ZN as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2DLO OCA].
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<StructureSection load='2dlo' size='340' side='right'caption='[[2dlo]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[2dlo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DLO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DLO FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dlo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dlo OCA], [https://pdbe.org/2dlo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dlo RCSB], [https://www.ebi.ac.uk/pdbsum/2dlo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dlo ProSAT], [https://www.topsan.org/Proteins/RSGI/2dlo TOPSAN]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TRIP6_HUMAN TRIP6_HUMAN] Relays signals from the cell surface to the nucleus to weaken adherens junction and promote actin cytoskeleton reorganization and cell invasiveness. Involved in lysophosphatidic acid-induced cell adhesion and migration. Acts as a transcriptional coactivator for NF-kappa-B and JUN, and mediates the transrepression of these transcription factors induced by glucocorticoid receptor.<ref>PMID:15489293</ref> <ref>PMID:14688263</ref> <ref>PMID:16624523</ref> <ref>PMID:19017743</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dl/2dlo_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dlo ConSurf].
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<div style="clear:both"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Hayashi, F.]]
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[[Category: Hayashi F]]
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[[Category: Qin, X.R.]]
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[[Category: Qin XR]]
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[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
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[[Category: Yokoyama S]]
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[[Category: Yokoyama, S.]]
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[[Category: ZN]]
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[[Category: lim domain]]
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[[Category: national project on protein structural and functional analyses]]
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[[Category: nppsfa]]
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[[Category: opa-interacting protein 1]]
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[[Category: riken structural genomics/proteomics initiative]]
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[[Category: rsgi]]
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[[Category: structural genomics]]
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[[Category: thyroid receptor interacting protein 6 (trip6)]]
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[[Category: zyxin related protein 1 (zrp-1) ]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 21:35:59 2007''
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Current revision

Solution structure of the second LIM domain of human Thyroid receptor-interacting protein 6

PDB ID 2dlo

Drag the structure with the mouse to rotate

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