2dmf
From Proteopedia
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(New page: 200px<br /> <applet load="2dmf" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dmf" /> '''An extended conformation of the RWD domain ...) |
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| - | [[Image:2dmf.gif|left|200px]]<br /> | ||
| - | <applet load="2dmf" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2dmf" /> | ||
| - | '''An extended conformation of the RWD domain of human Ring finger protein 25'''<br /> | ||
| - | == | + | ==An extended conformation of the RWD domain of human Ring finger protein 25== |
| - | + | <StructureSection load='2dmf' size='340' side='right'caption='[[2dmf]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2dmf]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DMF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DMF FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dmf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dmf OCA], [https://pdbe.org/2dmf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dmf RCSB], [https://www.ebi.ac.uk/pdbsum/2dmf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dmf ProSAT], [https://www.topsan.org/Proteins/RSGI/2dmf TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/RNF25_HUMAN RNF25_HUMAN] E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of NKD2 (By similarity). Stimulates transcription mediated by NF-kappa-B.<ref>PMID:12748188</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/2dmf_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dmf ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Harada | + | [[Category: Harada T]] |
| - | [[Category: Kigawa | + | [[Category: Kigawa T]] |
| - | [[Category: Koshiba | + | [[Category: Koshiba S]] |
| - | + | [[Category: Tochio N]] | |
| - | [[Category: Tochio | + | [[Category: Watabe S]] |
| - | [[Category: Watabe | + | [[Category: Yokoyama S]] |
| - | [[Category: Yokoyama | + | [[Category: Yoneyama M]] |
| - | [[Category: Yoneyama | + | |
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Current revision
An extended conformation of the RWD domain of human Ring finger protein 25
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Categories: Homo sapiens | Large Structures | Harada T | Kigawa T | Koshiba S | Tochio N | Watabe S | Yokoyama S | Yoneyama M
