This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2dmn
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="2dmn" size="450" color="white" frame="true" align="right" spinBox="true" caption="2dmn" /> '''The solution structure of the homeobox doma...) |
|||
| (15 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2dmn.gif|left|200px]]<br /> | ||
| - | <applet load="2dmn" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2dmn" /> | ||
| - | '''The solution structure of the homeobox domain of human homeobox protein TGIF2LX'''<br /> | ||
| - | == | + | ==The solution structure of the homeobox domain of human homeobox protein TGIF2LX== |
| - | + | <StructureSection load='2dmn' size='340' side='right'caption='[[2dmn]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2dmn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DMN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DMN FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dmn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dmn OCA], [https://pdbe.org/2dmn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dmn RCSB], [https://www.ebi.ac.uk/pdbsum/2dmn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dmn ProSAT], [https://www.topsan.org/Proteins/RSGI/2dmn TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/TF2LX_HUMAN TF2LX_HUMAN] May have a transcription role in testis. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dm/2dmn_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dmn ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Inoue | + | [[Category: Inoue M]] |
| - | [[Category: Kigawa | + | [[Category: Kigawa T]] |
| - | [[Category: Koshiba | + | [[Category: Koshiba S]] |
| - | [[Category: Ohnishi | + | [[Category: Ohnishi S]] |
| - | + | [[Category: Saito K]] | |
| - | [[Category: Saito | + | [[Category: Sasagawa A]] |
| - | [[Category: Sasagawa | + | [[Category: Tochio N]] |
| - | [[Category: Tochio | + | [[Category: Yokoyama S]] |
| - | [[Category: Yokoyama | + | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
The solution structure of the homeobox domain of human homeobox protein TGIF2LX
| |||||||||||
Categories: Homo sapiens | Large Structures | Inoue M | Kigawa T | Koshiba S | Ohnishi S | Saito K | Sasagawa A | Tochio N | Yokoyama S
