Template:STRUCTURE 2agi
From Proteopedia
(Difference between revisions)
(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2agi, resolution 1.140Å (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=AC...) |
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{{Structure | {{Structure | ||
| - | |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2agi, resolution 1. | + | |PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2agi]], [[Resolution|resolution]] 1.14Å (<scene name='initialview01'>default scene</scene>)}}} |
| - | + | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> | |
| - | |LIGAND= | + | |
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span> | |ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/Trypsin Trypsin], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.21.4 3.4.21.4] </span> | ||
| - | |GENE= | ||
| - | |DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=cd00190 Tryp_SPc]</span> | ||
|RELATEDENTRY=[[2age|2age]], [[2agg|2agg]], [[2ah4|2ah4]] | |RELATEDENTRY=[[2age|2age]], [[2agg|2agg]], [[2ah4|2ah4]] | ||
| - | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2agi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2agi OCA], [http://www.ebi.ac.uk/pdbsum/2agi PDBsum], [http://www. | + | |NONSTDRES=<scene name='pdbligand=ACE:ACETYL+GROUP'>ACE</scene>, <scene name='pdbligand=AR7:AMINO{[(4S)-4-AMINO-5,5-DIHYDROXYPENTYL]AMINO}METHANIMINIUM'>AR7</scene> |
| + | |RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2agi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2agi OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2agi RCSB], [http://www.ebi.ac.uk/pdbsum/2agi PDBsum]</span> | ||
| + | |SARESOURCES=<span class='plainlinks'>CATH : [http://www.cathdb.info/domain/2agiX02 2Agix02], [http://www.cathdb.info/domain/2agiX01 2Agix01]<br>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001254 Ipr001254], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR018114 Ipr018114], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR009003 Ipr009003], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001314 Ipr001314]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00089 PF00089]<br>SCOP : [http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?search_type=SCOP&key=126726 d2agix1]</span> | ||
| + | |uPDB=2AGI|CONSURF={{!}}- | ||
| + | {{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]] | ||
| + | {{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" | ||
| + | {{!}} '''Toggle Conservation Colors:''' | ||
| + | {{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}} | ||
| + | Rows = identical sequences: | ||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>A [x]</text> | ||
| + | <name>jmb_2agi_A</name> | ||
| + | <title>toggle chain A</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
| + | <jmol> | ||
| + | <jmolButton> | ||
| + | <script></script> | ||
| + | <text>B [x]</text> | ||
| + | <name>jmb_2agi_B</name> | ||
| + | <title>toggle chain B</title> | ||
| + | <jsscript>ConsurfChainButton(elementClicked)</jsscript> | ||
| + | <appendtargetsuffixtoid>true</appendtargetsuffixtoid> | ||
| + | </jmolButton> | ||
| + | </jmol> | ||
| + | |||
}} | }} | ||
Current revision
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| 2agi, resolution 1.14Å () | |||||||||
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| Ligands: | , | ||||||||
| Non-Standard Residues: | , | ||||||||
| Activity: | Trypsin, with EC number 3.4.21.4 | ||||||||
| Related: | 2age, 2agg, 2ah4 | ||||||||
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| Resources: | FirstGlance, OCA, RCSB, PDBsum | ||||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||||
