This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2aqp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:23, 3 April 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2aqp.jpg|left|200px]]
 
-
<!--
+
==CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant==
-
The line below this paragraph, containing "STRUCTURE_2aqp", creates the "Structure Box" on the page.
+
<StructureSection load='2aqp' size='340' side='right'caption='[[2aqp]], [[Resolution|resolution]] 1.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2aqp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQP FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CU1:COPPER+(I)+ION'>CU1</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2aqp| PDB=2aqp | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aqp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqp OCA], [https://pdbe.org/2aqp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aqp RCSB], [https://www.ebi.ac.uk/pdbsum/2aqp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aqp ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SODC_NEIMA SODC_NEIMA] Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aqp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2aqp ConSurf].
 +
<div style="clear:both"></div>
-
'''CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant'''
+
==See Also==
-
 
+
*[[Superoxide dismutase 3D structures|Superoxide dismutase 3D structures]]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
2AQP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Neisseria_meningitidis Neisseria meningitidis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQP OCA].
+
[[Category: Large Structures]]
[[Category: Neisseria meningitidis]]
[[Category: Neisseria meningitidis]]
-
[[Category: Single protein]]
+
[[Category: Bruns CK]]
-
[[Category: Superoxide dismutase]]
+
[[Category: Cabelli DE]]
-
[[Category: Bruns, C K.]]
+
[[Category: Cao Z]]
-
[[Category: Cabelli, D E.]]
+
[[Category: DiDonato M]]
-
[[Category: Cao, Z.]]
+
[[Category: Getzoff ED]]
-
[[Category: DiDonato, M.]]
+
[[Category: Kassmann CJ]]
-
[[Category: Getzoff, E D.]]
+
[[Category: Kroll JS]]
-
[[Category: Kassmann, C J.]]
+
[[Category: Tabatabai LB]]
-
[[Category: Kroll, J S.]]
+
-
[[Category: Tabatabai, L B.]]
+
-
[[Category: Electrostatic guidance]]
+
-
[[Category: Neisseria meningitidi]]
+
-
[[Category: Superoxide dismutase]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 19:21:24 2008''
+

Current revision

CU/ZN superoxide dismutase from neisseria meningitidis E73A mutant

PDB ID 2aqp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2aqp"
Personal tools