This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2e6q

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /> <applet load="2e6q" size="450" color="white" frame="true" align="right" spinBox="true" caption="2e6q" /> '''Solution structure of the Ig-like domain (6...)
Current revision (18:47, 29 May 2024) (edit) (undo)
 
(17 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2e6q.gif|left|200px]]<br />
 
-
<applet load="2e6q" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2e6q" />
 
-
'''Solution structure of the Ig-like domain (615-713) from human Obscurin-like protein 1'''<br />
 
-
==About this Structure==
+
==Solution structure of the Ig-like domain (615-713) from human Obscurin-like protein 1==
-
2E6Q is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=2E6Q OCA].
+
<StructureSection load='2e6q' size='340' side='right'caption='[[2e6q]]' scene=''>
-
[[Category: Homo sapiens]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2e6q]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2E6Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2E6Q FirstGlance]. <br>
-
[[Category: Hayashi, F.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
[[Category: Qin, X.R.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2e6q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2e6q OCA], [https://pdbe.org/2e6q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2e6q RCSB], [https://www.ebi.ac.uk/pdbsum/2e6q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2e6q ProSAT], [https://www.topsan.org/Proteins/RSGI/2e6q TOPSAN]</span></td></tr>
-
[[Category: RSGI, RIKEN.Structural.Genomics/Proteomics.Initiative.]]
+
</table>
-
[[Category: Suetake, T.]]
+
== Disease ==
-
[[Category: Yokoyama, S.]]
+
[https://www.uniprot.org/uniprot/OBSL1_HUMAN OBSL1_HUMAN] Defects in OBSL1 are the cause of 3M syndrome type 2 (3M2) [MIM:[https://omim.org/entry/612921 612921]. An autosomal recessive disorder characterized by severe pre- and postnatal growth retardation, facial dysmorphism, large head circumference, and normal intelligence and endocrine function. Skeletal changes include long slender tubular bones and tall vertebral bodies.<ref>PMID:19481195</ref>
-
[[Category: ig-like domain; obscurin-like protein 1]]
+
== Function ==
-
[[Category: national project on protein structural and functional analyses]]
+
[https://www.uniprot.org/uniprot/OBSL1_HUMAN OBSL1_HUMAN]
-
[[Category: nppsfa]]
+
== Evolutionary Conservation ==
-
[[Category: riken structural genomics/proteomics initiative]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: rsgi]]
+
Check<jmol>
-
[[Category: structural genomics]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e6/2e6q_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2e6q ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Mon Nov 12 21:46:27 2007''
+
==See Also==
 +
*[[Obscurin|Obscurin]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Homo sapiens]]
 +
[[Category: Large Structures]]
 +
[[Category: Hayashi F]]
 +
[[Category: Qin XR]]
 +
[[Category: Suetake T]]
 +
[[Category: Yokoyama S]]

Current revision

Solution structure of the Ig-like domain (615-713) from human Obscurin-like protein 1

PDB ID 2e6q

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools