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2edo
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="2edo" size="450" color="white" frame="true" align="right" spinBox="true" caption="2edo" /> '''Solution structure of the first ig-like dom...) |
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| - | [[Image:2edo.gif|left|200px]]<br /> | ||
| - | <applet load="2edo" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2edo" /> | ||
| - | '''Solution structure of the first ig-like domain from human CD48 antigen'''<br /> | ||
| - | == | + | ==Solution structure of the first ig-like domain from human CD48 antigen== |
| - | + | <StructureSection load='2edo' size='340' side='right'caption='[[2edo]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2edo]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EDO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EDO FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2edo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2edo OCA], [https://pdbe.org/2edo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2edo RCSB], [https://www.ebi.ac.uk/pdbsum/2edo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2edo ProSAT], [https://www.topsan.org/Proteins/RSGI/2edo TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/CD48_HUMAN CD48_HUMAN] Ligand for CD2. Might facilitate interaction between activated lymphocytes. Probably involved in regulating T-cell activation. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ed/2edo_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2edo ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Hayashi | + | [[Category: Hayashi F]] |
| - | [[Category: Nagashima | + | [[Category: Nagashima K]] |
| - | [[Category: Nagashima | + | [[Category: Nagashima T]] |
| - | + | [[Category: Yokoyama S]] | |
| - | [[Category: Yokoyama | + | [[Category: Yoshida M]] |
| - | [[Category: Yoshida | + | |
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Current revision
Solution structure of the first ig-like domain from human CD48 antigen
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