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2em6
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="2em6" size="450" color="white" frame="true" align="right" spinBox="true" caption="2em6" /> '''Solution structure of the C2H2 type zinc fi...) |
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| - | [[Image:2em6.gif|left|200px]]<br /> | ||
| - | <applet load="2em6" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2em6" /> | ||
| - | '''Solution structure of the C2H2 type zinc finger (region 199-231) of human Zinc finger protein 224'''<br /> | ||
| - | == | + | ==Solution structure of the C2H2 type zinc finger (region 199-231) of human Zinc finger protein 224== |
| - | + | <StructureSection load='2em6' size='340' side='right'caption='[[2em6]]' scene=''> | |
| + | == Structural highlights == | ||
| + | <table><tr><td colspan='2'>[[2em6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2EM6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2EM6 FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2em6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2em6 OCA], [https://pdbe.org/2em6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2em6 RCSB], [https://www.ebi.ac.uk/pdbsum/2em6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2em6 ProSAT], [https://www.topsan.org/Proteins/RSGI/2em6 TOPSAN]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/ZN224_HUMAN ZN224_HUMAN] May be involved in transcriptional regulation as a transcriptional repressor. The DEPDC1A-ZNF224 complex may play a critical role in bladder carcinogenesis by repressing the transcription of the A20 gene, leading to transport of NF-KB protein into the nucleus, resulting in suppression of apoptosis of bladder cancer cells.<ref>PMID:20587513</ref> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/em/2em6_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2em6 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: Abe | + | [[Category: Abe H]] |
| - | [[Category: Kigawa | + | [[Category: Kigawa T]] |
| - | [[Category: Kobayashi | + | [[Category: Kobayashi N]] |
| - | [[Category: Koshiba | + | [[Category: Koshiba S]] |
| - | [[Category: Li | + | [[Category: Li H]] |
| - | + | [[Category: Saito K]] | |
| - | [[Category: Saito | + | [[Category: Sato M]] |
| - | [[Category: Sato | + | [[Category: Tochio N]] |
| - | [[Category: Tochio | + | [[Category: Tomizawa T]] |
| - | [[Category: Tomizawa | + | [[Category: Yokoyama S]] |
| - | [[Category: Yokoyama | + | |
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Current revision
Solution structure of the C2H2 type zinc finger (region 199-231) of human Zinc finger protein 224
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Categories: Homo sapiens | Large Structures | Abe H | Kigawa T | Kobayashi N | Koshiba S | Li H | Saito K | Sato M | Tochio N | Tomizawa T | Yokoyama S
