This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2b30

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:33, 23 August 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2b30.gif|left|200px]]
 
-
<!--
+
==Initial Crystallographic Structural Analysis of a putative HAD/COF-like hydrolase from Plasmodium vivax==
-
The line below this paragraph, containing "STRUCTURE_2b30", creates the "Structure Box" on the page.
+
<StructureSection load='2b30' size='340' side='right'caption='[[2b30]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2b30]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_vivax Plasmodium vivax]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B30 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2B30 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
{{STRUCTURE_2b30| PDB=2b30 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2b30 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2b30 OCA], [https://pdbe.org/2b30 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2b30 RCSB], [https://www.ebi.ac.uk/pdbsum/2b30 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2b30 ProSAT]</span></td></tr>
-
 
+
</table>
-
'''Initial Crystallographic Structural Analysis of a putative HAD/COF-like hydrolase from Plasmodium vivax'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/A5K063_PLAVS A5K063_PLAVS]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2B30 OCA].
+
Check<jmol>
-
[[Category: Bosch, J.]]
+
<jmolCheckbox>
-
[[Category: Hol, W G.J.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b3/2b30_consurf.spt"</scriptWhenChecked>
-
[[Category: Robien, M A.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Protein structure initiative]]
+
</jmolCheckbox>
-
[[Category: Psi]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2b30 ConSurf].
-
[[Category: Sgpp]]
+
<div style="clear:both"></div>
-
[[Category: Structural genomic]]
+
__TOC__
-
[[Category: Structural genomics of pathogenic protozoa consortium]]
+
</StructureSection>
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 19:47:14 2008''
+
[[Category: Large Structures]]
 +
[[Category: Plasmodium vivax]]
 +
[[Category: Bosch J]]
 +
[[Category: Hol WGJ]]
 +
[[Category: Robien MA]]

Current revision

Initial Crystallographic Structural Analysis of a putative HAD/COF-like hydrolase from Plasmodium vivax

PDB ID 2b30

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2b30"
Personal tools