Template:STRUCTURE 2c5u

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m (Protected "Template:STRUCTURE 2c5u" [edit=sysop:move=sysop])
Current revision (02:59, 26 July 2012) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2c5u, resolution 2.21&Aring; (<scene name='initialview01'>initial scene</scene>)
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|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2c5u]], [[Resolution|resolution]] 2.21&Aring; (<scene name='initialview01'>default scene</scene>)}}}
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|SITE= <scene name='pdbsite=AC1:Cl+Binding+Site+For+Chain+A'>AC1</scene>
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|LIGAND= <scene name='pdbligand=APC:DIPHOSPHOMETHYLPHOSPHONIC+ACID+ADENOSYL+ESTER'>APC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>
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|LIGAND= <scene name='pdbligand=APC:DIPHOSPHOMETHYLPHOSPHONIC+ACID+ADENOSYL+ESTER'>APC</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/RNA_ligase_(ATP) RNA ligase (ATP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.5.1.3 6.5.1.3] </span>
|ACTIVITY= <span class='plainlinks'>[http://en.wikipedia.org/wiki/RNA_ligase_(ATP) RNA ligase (ATP)], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.5.1.3 6.5.1.3] </span>
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|GENE=
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|NONSTDRES=<scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>
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|DOMAIN=<span class='plainlinks'>[http://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=pfam09511 RNA_lig_T4_1]</span>
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|RELATEDENTRY=
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c5u OCA], [http://www.ebi.ac.uk/pdbsum/2c5u PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2c5u RCSB]</span>
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2c5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2c5u OCA], [http://www.ebi.ac.uk/pdbsum/2c5u PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2c5u RCSB]</span>
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|FUNCTION={{GO|id=GO:0016874 | text = ligase activity}}{{GO|id=GO:0046872 | text = metal ion binding}}{{GO|id=GO:0000287 | text = magnesium ion binding}}{{GO|id=GO:0003972 | text = RNA ligase (ATP) activity}}{{GO|id=GO:0005524 | text = ATP binding}}{{GO|id=GO:0000166 | text = nucleotide binding}}
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|PROCESS={{GO|id=GO:0042245 | text = RNA repair}}
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|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012648 Ipr012648]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?P00971 P00971]</span>
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|uPDB=2C5U|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
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<jmolButton>
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<script></script>
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<text>A [x]</text>
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<name>jmb_2c5u_A</name>
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<title>toggle chain A</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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<jmol>
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<jmolButton>
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<script></script>
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<text>B [x]</text>
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<name>jmb_2c5u_B</name>
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<title>toggle chain B</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
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</jmolButton>
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</jmol>
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}}
}}

Current revision

Drag the structure with the mouse to rotate
2c5u, resolution 2.21Å ()
Ligands: , , ,
Non-Standard Residues:
Activity: RNA ligase (ATP), with EC number 6.5.1.3
Resources: FirstGlance, OCA, PDBsum, RCSB
Coordinates: save as pdb, mmCIF, xml


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