2cps

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[[Image:2cps.jpg|left|200px]]
 
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==SOLUTION NMR STRUCTURES OF THE MAJOR COAT PROTEIN OF FILAMENTOUS BACTERIOPHAGE M13 SOLUBILIZED IN SODIUM DODECYL SULPHATE MICELLES, 25 LOWEST ENERGY STRUCTURES==
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The line below this paragraph, containing "STRUCTURE_2cps", creates the "Structure Box" on the page.
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<StructureSection load='2cps' size='340' side='right'caption='[[2cps]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2cps]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_M13 Escherichia virus M13]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CPS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CPS FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cps FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cps OCA], [https://pdbe.org/2cps PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cps RCSB], [https://www.ebi.ac.uk/pdbsum/2cps PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cps ProSAT]</span></td></tr>
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{{STRUCTURE_2cps| PDB=2cps | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_BPM13 CAPSD_BPM13] Self assembles to form a helical capsid wrapping up the viral genomic DNA. The capsid displays a filamentous structure with a length of 760-1950 nm and a width of 6-8 nm. The virion assembly and budding take place at the host inner membrane.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The three-dimensional structure of the major coat protein of bacteriophage M13, solubilized in detergent micelles, has been determined using heteronuclear multidimensional NMR and restrained molecular dynamics. The protein consists of two alpha-helices, running from residues 8 to 16 and 25 to 45, respectively. These two helices are connected by a flexible and distorted helical hinge region. The structural properties of the coat protein make it resemble a flail, in which the hydrophobic helix (residues 25 to 45) is the handle and the other, amphipathic, helix the swingle. In this metaphor, the hinge region is the connecting piece of leather. The mobility of the residues in the hinge region is likely to enable a smooth transformation from the membrane-bound form, mimicked by the structure in detergent micelles, into the structure in the mature phage. A specific distribution of the residues over the surface of the two helices was observed in the presented high-resolution structure of the membrane-bound form of the major coat protein as well as in the structure in the mature phage. All data suggest that this arrangement of residues is important for the interactions of the protein with the membrane, for correct protein-DNA and protein-protein interactions in the phage and for a proper growth of the phage during the assembly process. By combining our findings with earlier NMR results on the major coat protein in detergent micelles, we were able to construct a model that addresses the role of specific residues in the assembly process.
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'''SOLUTION NMR STRUCTURES OF THE MAJOR COAT PROTEIN OF FILAMENTOUS BACTERIOPHAGE M13 SOLUBILIZED IN SODIUM DODECYL SULPHATE MICELLES, 25 LOWEST ENERGY STRUCTURES'''
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Solution structure of the M13 major coat protein in detergent micelles: a basis for a model of phage assembly involving specific residues.,Papavoine CH, Christiaans BE, Folmer RH, Konings RN, Hilbers CW J Mol Biol. 1998 Sep 18;282(2):401-19. PMID:9735296<ref>PMID:9735296</ref>
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==Overview==
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The three-dimensional structure of the major coat protein of bacteriophage M13, solubilized in detergent micelles, has been determined using heteronuclear multidimensional NMR and restrained molecular dynamics. The protein consists of two alpha-helices, running from residues 8 to 16 and 25 to 45, respectively. These two helices are connected by a flexible and distorted helical hinge region. The structural properties of the coat protein make it resemble a flail, in which the hydrophobic helix (residues 25 to 45) is the handle and the other, amphipathic, helix the swingle. In this metaphor, the hinge region is the connecting piece of leather. The mobility of the residues in the hinge region is likely to enable a smooth transformation from the membrane-bound form, mimicked by the structure in detergent micelles, into the structure in the mature phage. A specific distribution of the residues over the surface of the two helices was observed in the presented high-resolution structure of the membrane-bound form of the major coat protein as well as in the structure in the mature phage. All data suggest that this arrangement of residues is important for the interactions of the protein with the membrane, for correct protein-DNA and protein-protein interactions in the phage and for a proper growth of the phage during the assembly process. By combining our findings with earlier NMR results on the major coat protein in detergent micelles, we were able to construct a model that addresses the role of specific residues in the assembly process.
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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2CPS is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_m13 Enterobacteria phage m13]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CPS OCA].
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</div>
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<div class="pdbe-citations 2cps" style="background-color:#fffaf0;"></div>
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==Reference==
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==See Also==
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Solution structure of the M13 major coat protein in detergent micelles: a basis for a model of phage assembly involving specific residues., Papavoine CH, Christiaans BE, Folmer RH, Konings RN, Hilbers CW, J Mol Biol. 1998 Sep 18;282(2):401-19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/9735296 9735296]
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*[[Virus coat proteins 3D structures|Virus coat proteins 3D structures]]
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[[Category: Enterobacteria phage m13]]
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== References ==
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[[Category: Single protein]]
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<references/>
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[[Category: Christiaans, B E.C.]]
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__TOC__
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[[Category: Folmer, R H.A.]]
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</StructureSection>
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[[Category: Hilbers, C W.]]
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[[Category: Escherichia virus M13]]
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[[Category: Konings, R N.H.]]
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[[Category: Large Structures]]
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[[Category: Papavoine, C H.M.]]
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[[Category: Christiaans BEC]]
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[[Category: Assembly]]
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[[Category: Folmer RHA]]
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[[Category: Bacteriophage m13]]
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[[Category: Hilbers CW]]
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[[Category: Major coat protein]]
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[[Category: Konings RNH]]
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[[Category: Membrane]]
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[[Category: Papavoine CHM]]
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[[Category: Micelle]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 22:45:30 2008''
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Current revision

SOLUTION NMR STRUCTURES OF THE MAJOR COAT PROTEIN OF FILAMENTOUS BACTERIOPHAGE M13 SOLUBILIZED IN SODIUM DODECYL SULPHATE MICELLES, 25 LOWEST ENERGY STRUCTURES

PDB ID 2cps

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