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Template:STRUCTURE 2cqf

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(New page: {{Structure |PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2cqf (<scene name='initialview01'>initial scene</scene>) |SITE= |LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene> |AC...)
Current revision (10:44, 6 January 2013) (edit) (undo)
 
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{{Structure
{{Structure
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|PDB= {{{PDB}}}|SCENE={{{SCENE}}}|SIZE=350|CAPTION= 2cqf (<scene name='initialview01'>initial scene</scene>)
+
|PDB= {{{PDB}}}|SCENE={{{SCENE|}}}|SIZE={{{SIZE|350}}}|CAPTION={{{CAPTION|[[2cqf]], [[NMR_Ensembles_of_Models | 20 NMR models]] (<scene name='initialview01'>default scene</scene>)}}}
-
|SITE=
+
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
|LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>
-
|ACTIVITY=
 
|GENE= LIN28 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
|GENE= LIN28 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])
-
|DOMAIN=
+
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cqf OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2cqf RCSB], [http://www.ebi.ac.uk/pdbsum/2cqf PDBsum], [http://www.topsan.org/Proteins/RSGI/2cqf TOPSAN]</span>
-
|RELATEDENTRY=
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|FUNCTION={{GO|id=GO:0003676 | text = nucleic acid binding}}{{GO|id=GO:0008270 | text = zinc ion binding}}{{GO|id=GO:0003677 | text = DNA binding}}{{GO|id=GO:0046872 | text = metal ion binding}}
-
|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2cqf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cqf OCA], [http://www.ebi.ac.uk/pdbsum/2cqf PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2cqf RCSB]</span>
+
|PROCESS={{GO|id=GO:0006355 | text = regulation of transcription, DNA-dependent}}
 +
|COMPONENT={{GO|id=GO:0005634 | text = nucleus}}{{GO|id=GO:0005737 | text = cytoplasm}}
 +
|SARESOURCES=<span class='plainlinks'>InterPro : [http://www.ebi.ac.uk/interpro/ISearch?query=IPR012340 Ipr012340], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR001878 Ipr001878], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR013084 Ipr013084], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR011129 Ipr011129], [http://www.ebi.ac.uk/interpro/ISearch?query=IPR002059 Ipr002059]<br>Pfam : [http://pfam.sanger.ac.uk/family?acc=PF00098 PF00098]<br>UniProt : [http://ca.expasy.org/cgi-bin/niceprot.pl?Q9H9Z2 Q9H9Z2]</span>
 +
|uPDB=2CQF|CONSURF={{!}}-
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{{!}} colspan="2" style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;" {{!}} [[Image:Consurf_key_small.gif|center]]
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{{!}}-{{!}} style="background-color:#bac9f7;color:#040d44;vertical-align:top;text-align:left;"
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{{!}} '''Toggle Conservation Colors:'''
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{{!}} align="left" style="background-color:#acfaac;border-top:2px solid #dddddd; border-right:2px solid #dddddd" {{!}}
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Rows = identical sequences:
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<jmol>
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<jmolButton>
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<script></script>
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<text>A [x]</text>
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<name>jmb_2cqf_A</name>
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<title>toggle chain A</title>
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<jsscript>ConsurfChainButton(elementClicked)</jsscript>
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<appendtargetsuffixtoid>true</appendtargetsuffixtoid>
 +
</jmolButton>
 +
</jmol>
 +
 
}}
}}

Current revision

Drag the structure with the mouse to rotate
2cqf, 20 NMR models ()
Ligands:
Gene: LIN28 (Homo sapiens)
Resources: FirstGlance, OCA, RCSB, PDBsum, TOPSAN
Coordinates: save as pdb, mmCIF, xml


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