2cqz

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 25 October 2023) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cqz.gif|left|200px]]
 
-
<!--
+
==Crystal Structure of PH0347 protein from Pyrococcus horikoshii OT3==
-
The line below this paragraph, containing "STRUCTURE_2cqz", creates the "Structure Box" on the page.
+
<StructureSection load='2cqz' size='340' side='right'caption='[[2cqz]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2cqz]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CQZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CQZ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene></td></tr>
-
{{STRUCTURE_2cqz| PDB=2cqz | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cqz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cqz OCA], [https://pdbe.org/2cqz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cqz RCSB], [https://www.ebi.ac.uk/pdbsum/2cqz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cqz ProSAT], [https://www.topsan.org/Proteins/RSGI/2cqz TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal Structure of PH0347 protein from Pyrococcus horikoshii OT3'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/O58085_PYRHO O58085_PYRHO]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2CQZ is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CQZ OCA].
+
Check<jmol>
-
[[Category: Pyrococcus horikoshii]]
+
<jmolCheckbox>
-
[[Category: Single protein]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cq/2cqz_consurf.spt"</scriptWhenChecked>
-
[[Category: Kunishima, N.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Lokanath, N K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
</jmolCheckbox>
-
[[Category: Terao, Y.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cqz ConSurf].
-
[[Category: Hypothetical protein]]
+
<div style="clear:both"></div>
-
[[Category: National project on protein structural and functional analyse]]
+
__TOC__
-
[[Category: Nppsfa]]
+
</StructureSection>
-
[[Category: Riken structural genomics/proteomics initiative]]
+
[[Category: Large Structures]]
-
[[Category: Rsgi]]
+
[[Category: Pyrococcus horikoshii OT3]]
-
[[Category: Structural genomic]]
+
[[Category: Kunishima N]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 22:51:00 2008''
+
[[Category: Lokanath NK]]
 +
[[Category: Terao Y]]

Current revision

Crystal Structure of PH0347 protein from Pyrococcus horikoshii OT3

PDB ID 2cqz

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools