2cuk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:20, 25 October 2023) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cuk.gif|left|200px]]
 
-
<!--
+
==Crystal structure of TT0316 protein from Thermus thermophilus HB8==
-
The line below this paragraph, containing "STRUCTURE_2cuk", creates the "Structure Box" on the page.
+
<StructureSection load='2cuk' size='340' side='right'caption='[[2cuk]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2cuk]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CUK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CUK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NHE:2-[N-CYCLOHEXYLAMINO]ETHANE+SULFONIC+ACID'>NHE</scene></td></tr>
-
{{STRUCTURE_2cuk| PDB=2cuk | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cuk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cuk OCA], [https://pdbe.org/2cuk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cuk RCSB], [https://www.ebi.ac.uk/pdbsum/2cuk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cuk ProSAT], [https://www.topsan.org/Proteins/RSGI/2cuk TOPSAN]</span></td></tr>
-
 
+
</table>
-
'''Crystal structure of TT0316 protein from Thermus thermophilus HB8'''
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q5SMG6_THET8 Q5SMG6_THET8]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
2CUK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CUK OCA].
+
Check<jmol>
-
[[Category: Single protein]]
+
<jmolCheckbox>
-
[[Category: Thermus thermophilus]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cu/2cuk_consurf.spt"</scriptWhenChecked>
-
[[Category: Kunishima, N.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Lokanath, N K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
</jmolCheckbox>
-
[[Category: Glycerate dehydrogenase]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cuk ConSurf].
-
[[Category: National project on protein structural and functional analyse]]
+
<div style="clear:both"></div>
-
[[Category: Nppsfa]]
+
__TOC__
-
[[Category: Riken structural genomics/proteomics initiative]]
+
</StructureSection>
-
[[Category: Rsgi]]
+
[[Category: Large Structures]]
-
[[Category: Structural genomic]]
+
[[Category: Thermus thermophilus HB8]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 23:06:02 2008''
+
[[Category: Kunishima N]]
 +
[[Category: Lokanath NK]]

Current revision

Crystal structure of TT0316 protein from Thermus thermophilus HB8

PDB ID 2cuk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2cuk"
Personal tools