2f09

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:58, 30 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2f09.gif|left|200px]]
 
-
<!--
+
==Solution Structure of the gene product of E. coli gene ydhA==
-
The line below this paragraph, containing "STRUCTURE_2f09", creates the "Structure Box" on the page.
+
<StructureSection load='2f09' size='340' side='right'caption='[[2f09]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2f09]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F09 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2F09 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2f09 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2f09 OCA], [https://pdbe.org/2f09 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2f09 RCSB], [https://www.ebi.ac.uk/pdbsum/2f09 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2f09 ProSAT]</span></td></tr>
-
{{STRUCTURE_2f09| PDB=2f09 | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''Solution Structure of the gene product of E. coli gene ydhA'''
+
[https://www.uniprot.org/uniprot/MLIC_ECOLI MLIC_ECOLI] Specifically inhibits C-type lysozymes.<ref>PMID:18369469</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
2F09 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2F09 OCA].
+
<jmolCheckbox>
-
[[Category: Escherichia coli]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f0/2f09_consurf.spt"</scriptWhenChecked>
-
[[Category: Single protein]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: OCSP, Ontario Centre for Structural Proteomics.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Revington, M J.]]
+
</jmolCheckbox>
-
[[Category: Shaw, G S.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2f09 ConSurf].
-
[[Category: 8 strand beta-barrel]]
+
<div style="clear:both"></div>
-
[[Category: Ocsp]]
+
== References ==
-
[[Category: Ontario centre for structural proteomic]]
+
<references/>
-
[[Category: Structural genomic]]
+
__TOC__
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 03:18:31 2008''
+
</StructureSection>
 +
[[Category: Escherichia coli K-12]]
 +
[[Category: Large Structures]]
 +
[[Category: Revington MJ]]
 +
[[Category: Shaw GS]]

Current revision

Solution Structure of the gene product of E. coli gene ydhA

PDB ID 2f09

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools