2iyd
From Proteopedia
(Difference between revisions)
(New page: 200px<br /> <applet load="2iyd" size="450" color="white" frame="true" align="right" spinBox="true" caption="2iyd, resolution 3.20Å" /> '''SENP1 COVALENT COMP...) |
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| - | [[Image:2iyd.gif|left|200px]]<br /> | ||
| - | <applet load="2iyd" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2iyd, resolution 3.20Å" /> | ||
| - | '''SENP1 COVALENT COMPLEX WITH SUMO-2'''<br /> | ||
| - | == | + | ==SENP1 covalent complex with SUMO-2== |
| - | + | <StructureSection load='2iyd' size='340' side='right'caption='[[2iyd]], [[Resolution|resolution]] 3.20Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| - | [[ | + | <table><tr><td colspan='2'>[[2iyd]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IYD OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2IYD FirstGlance]. <br> |
| - | [[ | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2Å</td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2iyd FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2iyd OCA], [https://pdbe.org/2iyd PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2iyd RCSB], [https://www.ebi.ac.uk/pdbsum/2iyd PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2iyd ProSAT]</span></td></tr> | |
| - | [ | + | </table> |
| - | [[ | + | == Function == |
| - | [ | + | [https://www.uniprot.org/uniprot/SENP1_HUMAN SENP1_HUMAN] Protease that catalyzes two essential functions in the SUMO pathway: processing of full-length SUMO1, SUMO2 and SUMO3 to their mature forms and deconjugation of SUMO1, SUMO2 and SUMO3 from targeted proteins. Deconjugates SUMO1 from HIPK2. Deconjugates SUMO1 from HDAC1, which decreases its transcriptional repression activity.<ref>PMID:10652325</ref> <ref>PMID:15199155</ref> <ref>PMID:16253240</ref> <ref>PMID:16553580</ref> |
| - | [[ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/iy/2iyd_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2iyd ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[SUMO 3D Structures|SUMO 3D Structures]] | ||
| + | *[[Sentrin-specific protease|Sentrin-specific protease]] | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Homo sapiens]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Dong C]] | ||
| + | [[Category: Naismith JH]] | ||
Current revision
SENP1 covalent complex with SUMO-2
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