2fqc

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[[Image:2fqc.gif|left|200px]]
 
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==Solution structure of conotoxin pl14a==
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The line below this paragraph, containing "STRUCTURE_2fqc", creates the "Structure Box" on the page.
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<StructureSection load='2fqc' size='340' side='right'caption='[[2fqc]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2fqc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Conus_planorbis Conus planorbis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FQC FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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{{STRUCTURE_2fqc| PDB=2fqc | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fqc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fqc OCA], [https://pdbe.org/2fqc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fqc RCSB], [https://www.ebi.ac.uk/pdbsum/2fqc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fqc ProSAT]</span></td></tr>
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</table>
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'''Solution structure of conotoxin pl14a'''
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== Function ==
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[https://www.uniprot.org/uniprot/CJEA_CONPO CJEA_CONPO]
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<div style="background-color:#fffaf0;">
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==Overview==
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== Publication Abstract from PubMed ==
Using assay-directed fractionation of the venom from the vermivorous cone snail Conus planorbis, we isolated a new conotoxin, designated pl14a, with potent activity at both nicotinic acetylcholine receptors and a voltage-gated potassium channel subtype. pl14a contains 25 amino acid residues with an amidated C-terminus, an elongated N-terminal tail (six residues), and two disulfide bonds (1-3, 2-4 connectivity) in a novel framework distinct from other conotoxins. The peptide was chemically synthesized, and its three-dimensional structure was demonstrated to be well-defined, with an alpha-helix and two 3(10)-helices present. Analysis of a cDNA clone encoding the prepropeptide precursor of pl14a revealed a novel signal sequence, indicating that pl14a belongs to a new gene superfamily, the J-conotoxin superfamily. Five additional peptides in the J-superfamily were identified. Intracranial injection of pl14a in mice elicited excitatory symptoms that included shaking, rapid circling, barrel rolling, and seizures. Using the oocyte heterologous expression system, pl14a was shown to inhibit both a K+ channel subtype (Kv1.6, IC50 = 1.59 microM) and neuronal (IC50 = 8.7 microM for alpha3beta4) and neuromuscular (IC50 = 0.54 microM for alpha1beta1 epsilondelta) subtypes of the nicotinic acetylcholine receptor (nAChR). Similarities in sequence and structure are apparent between the middle loop of pl14a and the second loop of a number of alpha-conotoxins. This is the first conotoxin shown to affect the activity of both voltage-gated and ligand-gated ion channels.
Using assay-directed fractionation of the venom from the vermivorous cone snail Conus planorbis, we isolated a new conotoxin, designated pl14a, with potent activity at both nicotinic acetylcholine receptors and a voltage-gated potassium channel subtype. pl14a contains 25 amino acid residues with an amidated C-terminus, an elongated N-terminal tail (six residues), and two disulfide bonds (1-3, 2-4 connectivity) in a novel framework distinct from other conotoxins. The peptide was chemically synthesized, and its three-dimensional structure was demonstrated to be well-defined, with an alpha-helix and two 3(10)-helices present. Analysis of a cDNA clone encoding the prepropeptide precursor of pl14a revealed a novel signal sequence, indicating that pl14a belongs to a new gene superfamily, the J-conotoxin superfamily. Five additional peptides in the J-superfamily were identified. Intracranial injection of pl14a in mice elicited excitatory symptoms that included shaking, rapid circling, barrel rolling, and seizures. Using the oocyte heterologous expression system, pl14a was shown to inhibit both a K+ channel subtype (Kv1.6, IC50 = 1.59 microM) and neuronal (IC50 = 8.7 microM for alpha3beta4) and neuromuscular (IC50 = 0.54 microM for alpha1beta1 epsilondelta) subtypes of the nicotinic acetylcholine receptor (nAChR). Similarities in sequence and structure are apparent between the middle loop of pl14a and the second loop of a number of alpha-conotoxins. This is the first conotoxin shown to affect the activity of both voltage-gated and ligand-gated ion channels.
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==About this Structure==
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A novel conotoxin inhibitor of Kv1.6 channel and nAChR subtypes defines a new superfamily of conotoxins.,Imperial JS, Bansal PS, Alewood PF, Daly NL, Craik DJ, Sporning A, Terlau H, Lopez-Vera E, Bandyopadhyay PK, Olivera BM Biochemistry. 2006 Jul 11;45(27):8331-40. PMID:16819832<ref>PMID:16819832</ref>
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Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FQC OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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A novel conotoxin inhibitor of Kv1.6 channel and nAChR subtypes defines a new superfamily of conotoxins., Imperial JS, Bansal PS, Alewood PF, Daly NL, Craik DJ, Sporning A, Terlau H, Lopez-Vera E, Bandyopadhyay PK, Olivera BM, Biochemistry. 2006 Jul 11;45(27):8331-40. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16819832 16819832]
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</div>
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[[Category: Craik, D J.]]
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<div class="pdbe-citations 2fqc" style="background-color:#fffaf0;"></div>
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[[Category: Daly, N L.]]
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== References ==
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[[Category: Alpha-helix]]
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<references/>
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[[Category: Disulfide bond]]
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__TOC__
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun May 4 04:11:52 2008''
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</StructureSection>
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[[Category: Conus planorbis]]
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[[Category: Large Structures]]
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[[Category: Craik DJ]]
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[[Category: Daly NL]]

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Solution structure of conotoxin pl14a

PDB ID 2fqc

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