2h57
From Proteopedia
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- | [[Image:2h57.gif|left|200px]] | ||
- | + | ==Crystal structure of human ADP-ribosylation factor-like 6== | |
- | + | <StructureSection load='2h57' size='340' side='right'caption='[[2h57]], [[Resolution|resolution]] 2.00Å' scene=''> | |
- | + | == Structural highlights == | |
- | + | <table><tr><td colspan='2'>[[2h57]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H57 FirstGlance]. <br> | |
- | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2Å</td></tr> | |
- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr> | |
- | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h57 OCA], [https://pdbe.org/2h57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h57 RCSB], [https://www.ebi.ac.uk/pdbsum/2h57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h57 ProSAT]</span></td></tr> | |
- | + | </table> | |
- | ''' | + | == Disease == |
- | + | [https://www.uniprot.org/uniprot/ARL6_HUMAN ARL6_HUMAN] Defects in ARL6 are a cause of Bardet-Biedl syndrome type 3 (BBS3) [MIM:[https://omim.org/entry/209900 209900]. Bardet-Biedl syndrome (BBS) is a genetically heterogeneous disorder characterized by usually severe pigmentary retinopathy, early onset obesity, polydactyly, hypogenitalism, renal malformation and mental retardation. Secondary features include diabetes mellitus, hypertension and congenital heart disease.<ref>PMID:15258860</ref> <ref>PMID:15314642</ref> Defects in ARL6 are the cause of retinitis pigmentosa type 55 (RP55) [MIM:[https://omim.org/entry/613575 613575]. RP55 is a retinal dystrophy belonging to the group of pigmentary retinopathies. Retinitis pigmentosa is characterized by retinal pigment deposits visible on fundus examination and primary loss of rod photoreceptor cells followed by secondary loss of cone photoreceptors. Patients typically have night vision blindness and loss of midperipheral visual field. As their condition progresses, they lose their far peripheral visual field and eventually central vision as well.<ref>PMID:19956407</ref> | |
- | + | == Function == | |
- | == | + | [https://www.uniprot.org/uniprot/ARL6_HUMAN ARL6_HUMAN] Involved in membrane protein trafficking at the base of the ciliary organelle. Mediates recruitment onto plasma membrane of the BBSome complex which would constitute a coat complex required for sorting of specific membrane proteins to the primary cilia. May regulate cilia assembly and disassembly and subsequent ciliary signaling events such as the Wnt signaling cascade. Isoform 2 may be required for proper retinal function and organization.<ref>PMID:20603001</ref> <ref>PMID:20207729</ref> |
- | + | == Evolutionary Conservation == | |
- | + | [[Image:Consurf_key_small.gif|200px|right]] | |
- | == | + | Check<jmol> |
- | + | <jmolCheckbox> | |
+ | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h5/2h57_consurf.spt"</scriptWhenChecked> | ||
+ | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
+ | <text>to colour the structure by Evolutionary Conservation</text> | ||
+ | </jmolCheckbox> | ||
+ | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2h57 ConSurf]. | ||
+ | <div style="clear:both"></div> | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: | + | [[Category: Large Structures]] |
- | [[Category: Arrowsmith | + | [[Category: Arrowsmith CH]] |
- | [[Category: Bochkarev | + | [[Category: Bochkarev A]] |
- | [[Category: Edwards | + | [[Category: Edwards AM]] |
- | [[Category: Landry | + | [[Category: Landry R]] |
- | [[Category: Lew | + | [[Category: Lew J]] |
- | [[Category: Park | + | [[Category: Park H]] |
- | + | [[Category: Shen Y]] | |
- | [[Category: Shen | + | [[Category: Sundstrom M]] |
- | [[Category: Sundstrom | + | [[Category: Tempel W]] |
- | [[Category: Tempel | + | [[Category: Wang J]] |
- | [[Category: Wang | + | [[Category: Weigelt J]] |
- | [[Category: Weigelt | + | |
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Current revision
Crystal structure of human ADP-ribosylation factor-like 6
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Categories: Homo sapiens | Large Structures | Arrowsmith CH | Bochkarev A | Edwards AM | Landry R | Lew J | Park H | Shen Y | Sundstrom M | Tempel W | Wang J | Weigelt J